About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Key Reference Paper

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

<< First 2849 2850 2851 2852 2853 2854 2855 2856 2857 2858 Forward> Last>>        3063 pages in total

Gene IDDescription
CAI8054450.1UBIQUITIN SPECIFIC PROTEINASE
CAI8054452.1UBIQUITIN SPECIFIC PROTEINASE
CAI8054454.1-
CAI8054453.1-
CAI8054455.1PSEUDOURIDYLATE SYNTHASE
CAI8054457.1PSEUDOURIDYLATE SYNTHASE
CAI8054456.1PSEUDOURIDYLATE SYNTHASE
CAI8054458.1PSEUDOURIDYLATE SYNTHASE
CAI8054459.1BONUS, ISOFORM C-RELATED
CAI8054460.1BONUS, ISOFORM C-RELATED
CAI8054461.1PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE
CAI8054463.1DNA POLYMERASE CATALYTIC SUBUNIT
CAI8054469.1DNA POLYMERASE CATALYTIC SUBUNIT
CAI8054470.1DNA POLYMERASE CATALYTIC SUBUNIT
CAI8054471.1DNA POLYMERASE CATALYTIC SUBUNIT
CAI8054468.1DNA POLYMERASE CATALYTIC SUBUNIT
CAI8054467.1DNA POLYMERASE CATALYTIC SUBUNIT
CAI8054466.1DNA POLYMERASE CATALYTIC SUBUNIT
CAI8054465.1DNA POLYMERASE CATALYTIC SUBUNIT
CAI8054464.1DNA POLYMERASE CATALYTIC SUBUNIT
TOP