The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032881421.1 | 30S RIBOSOMAL PROTEIN S1 |
| XP_032881422.1 | EPM2A-INTERACTING PROTEIN 1 |
| XP_032881423.1 | SERINE/THREONINE-PROTEIN KINASE |
| XP_032881424.1 | ZINC FINGER PROTEIN |
| XP_032881425.1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
| XP_032881426.1 | |
| XP_032881427.1 | RHO FAMILY GTPASE |
| XP_032881428.1 | RHO FAMILY GTPASE |
| XP_032881429.1 | CYSTEINE-RICH PDZ-BINDING PROTEIN |
| XP_032881430.1 | ZINC FINGER PROTEIN |
| XP_032881431.1 | GTP CYCLOHYDROLASE I |
| XP_032881432.1 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
| XP_032881433.1 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
| XP_032881434.1 | MULTIPLE COAGULATION FACTOR DEFICIENCY PROTEIN 2 NEURAL STEM CELL DERIVED NEURONAL SURVIVAL PROTEIN |
| XP_032881435.1 | MULTIPLE COAGULATION FACTOR DEFICIENCY PROTEIN 2 NEURAL STEM CELL DERIVED NEURONAL SURVIVAL PROTEIN |
| XP_032881436.1 | PLEKHH PROTEIN |
| XP_032881437.1 | PLEKHH PROTEIN |
| XP_032881438.1 | THADA/DEATH RECEPTOR INTERACTING PROTEIN |
| XP_032881439.1 | THADA/DEATH RECEPTOR INTERACTING PROTEIN |
| XP_032881440.1 | CCCH ZINC FINGER/TIS11-RELATED |
| XP_032881441.1 | SH2 DOMAIN CONTAINING PROTEIN |
| XP_032881442.1 | 3-HYDROXYANTHRANILATE 3,4-DIOXYGENASE |
| XP_032881443.1 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
| XP_032881444.1 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
| XP_032881445.1 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
| XP_032881446.1 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
| XP_032881447.1 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
| XP_032881448.1 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
| XP_032881449.1 | VOLTAGE-GATED POTASSIUM CHANNEL |
| XP_032881450.1 | VOLTAGE-GATED POTASSIUM CHANNEL |
| XP_032881451.1 | CYTOCHROME C OXIDASE POLYPEPTIDE 7A |
| XP_032881452.1 | WD-40 REPEAT PROTEIN |
| XP_032881453.1 | WD-40 REPEAT PROTEIN |
| XP_032881454.1 | HEPARAN SULFATE SULFOTRANSFERASE |
| XP_032881455.1 | WD-40 REPEAT PROTEIN |
| XP_032881456.1 | WD-40 REPEAT PROTEIN |
| XP_032881457.1 | WD-40 REPEAT PROTEIN |
| XP_032881458.1 | WD-40 REPEAT PROTEIN |
| XP_032881459.1 | WD-40 REPEAT PROTEIN |
| XP_032881460.1 | WD-40 REPEAT PROTEIN |
| XP_032881461.1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| XP_032881462.1 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| XP_032881463.1 | GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1 |
| XP_032881464.1 | HEPARAN SULFATE SULFOTRANSFERASE |
| XP_032881465.1 | GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1 |
| XP_032881466.1 | GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1 |
| XP_032881467.1 | TUBULIN FOLDING COFACTOR C |
| XP_032881468.1 | TETRASPANIN |
| XP_032881469.1 | UBIQUITIN LIGASE E3 ALPHA-RELATED |
| XP_032881470.1 | UBIQUITIN LIGASE E3 ALPHA-RELATED |
