About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Key Reference Paper

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

<< First 2648 2649 2650 2651 2652 2653 2654 2655 2656 2657 Forward> Last>>        3063 pages in total

Gene IDDescription
CAI8050431.13-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE
CAI8050432.1-
CAI8050433.1NUDIX HYDROLASE, NUDC SUBFAMILY
CAI8050434.1PEPTIDYL-TRNA HYDROLASE
CAI8050435.1LUCIFERASE-LIKE MONOOXYGENASE
CAI8050436.1XYLOGLUCANASE (EUROFUNG)
CAI8050437.1BLR3294 PROTEIN
CAI8050438.1GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
CAI8050439.1PHOSPHOENOLPYRUVATE CARBOXYLASE
CAI8050440.1-
CAI8050441.1LUD_DOM DOMAIN-CONTAINING PROTEIN
CAI8050442.1THIOSULFATE SULFERTANSFERASE
CAI8050445.1SERINE-THREONINE PROTEIN KINASE
CAI8050444.1SERINE-THREONINE PROTEIN KINASE
CAI8050443.1-
CAI8050446.1SERINE-THREONINE PROTEIN KINASE
CAI8050447.1SERINE-THREONINE PROTEIN KINASE
CAI8050448.1SERINE-THREONINE PROTEIN KINASE
CAI8050453.1MICROSPHERULE PROTEIN 1
CAI8050452.1MICROSPHERULE PROTEIN 1
TOP