About Pseudoliparis swirei

Pseudoliparis swirei is a species of snailfish in the family Liparidae, discovered in the hadal zone of the Mariana Trench at depths exceeding 7,000 meters. This species is adapted to extreme deep-sea environments, thriving under immense pressure and near-freezing temperatures. Pseudoliparis swirei is characterized by its gelatinous body and reduced skeletal structure, which help it withstand the crushing pressures of the deep ocean. Its discovery provides valuable insights into the adaptations of vertebrates to one of the most extreme habitats on Earth.

Classification

Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Osteichthyes (Parvphylum); Actinopterygii (Gigaclass); Actinopteri (Superclass); Teleostei (Class); Perciformes (Order); Cottoidei (Suborder); Liparidae (Family); Pseudoliparis (Genus); Pseudoliparis swirei (Species)

Original Name

Pseudoliparis swirei Gerringer & Linley, 2017

Key Reference Paper

1. Gerringer M E, Linley T D, Jamieson A J, et al. Pseudoliparis swirei sp. nov.: a newly-discovered hadal snailfish (Scorpaeniformes: Liparidae) from the Mariana Trench[J]. Zootaxa, 2017, 4358(1): 161–177-161–177. (Gerringer et al., 2017)

Description

Holotype is immature. Ripe females had eggs up to 9.4 mm diameter, among the largest teleost eggs recorded, 0.4 mm smaller than the largest record. The eggs were unsorted within gonad, with the largest eggs free and interspersed within a matrix of smaller eggs. No developmental structures were visible within even the largest eggs. Two distinct size classes of eggs present with up to 23 large eggs (>5 mm) and up to 851 small eggs of less than half the diameter of the larger size class. There were rarely intermediate stages (Figure 7). Individuals with only small eggs had maximum egg sizes ranging from 0.7 to 1.4 mm. Genital papilla visible in freshly collected males, oriented anteriorly

Etymology

The Mariana Trench famously houses the ocean’s deepest point, at Challenger Deep, named for the HMS Challenger expedition which discovered the trench in 1875. Their deepest sounding of 8,184 m, then the greatest known ocean depth, was christened Swire Deep after Herbert Swire, the ship’s First Navigating Sublieutenant (Corfield 2003). We name this fish in his honor, in acknowledgment and gratitude of the crew members that have supported oceanographic research throughout history

Distribution

Known only from the Mariana Trench at capture depths from 6,898–7,966 m, individuals likely this species were recognized in video at depths 6,198–8,098 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordataMariana hadal snailfish (MHS)Deep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-684Mbscaffold2019--PRJNA47284691.70 25,738/4,21944-25,262

References
TitleJournalPubmed ID
Morphology and genome of a snailfish from the Mariana Trench provide insights into deep-sea adaptationNature Ecology & Evolution30988486

Gene Information

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Gene IDDescription
Tanaka05161FORMIN HOMOLOGY 2 FAMILY MEMBER
Tanaka05162TRANS-3-HYDROXY-L-PROLINE DEHYDRATASE
Tanaka05163SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE
Tanaka05164ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER
Tanaka05165ACETYL-COENZYME A SYNTHETASE
Tanaka05166VISUAL SYSTEM HOMEOBOX 2
Tanaka05167TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA
Tanaka05168TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN
Tanaka05169FOS TRANSCRIPTION FACTOR-RELATED
Tanaka05170FOS TRANSCRIPTION FACTOR-RELATED
Tanaka05171FOS TRANSCRIPTION FACTOR-RELATED
Tanaka05172DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED
Tanaka05173HOMEOBOX PROTEIN PROSPERO/PROX-1/CEH-26
Tanaka05174YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP
Tanaka05175KNIRPS-RELATED PROTEIN-RELATED
Tanaka05176TGF-BETA FAMILY
Tanaka05177MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
Tanaka05178FOS TRANSCRIPTION FACTOR-RELATED
Tanaka05179ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14
Tanaka05180BCL-2-MODIFYING FACTOR
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