About Ridgeia piscesae

Ridgeia piscesae is a tube worm found in a variety of environments on the Juan de Fuca Ridge. Found in clusters up to several square meters in area, these Polychaete’s lack a digestive tract, instead taking up organic carbon from symbiotic, chemoautotrophic bacteria found in their specially-evolved trophosomes. These bacteria oxidize sulfur in order to create organic material. Initially thought to be several species of the Ridgeia genus on the Juan de Fuca Ridge, genetic comparison showed that only one species existed, with various morphologies. The two extreme morphologies are the so-called long-skinny and fat-short forms.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Ridgeia (Genus); Ridgeia piscesae (Species)

Original Name

Ridgeia piscesae Jones, 1985

Key Reference Paper

1. Jones M L. On the Vestimentifera, new phylum: six new species, and other taxa, from hydrothermal vents and elsewhere[J]. Bull Biol Soc Wash, 1985, 6: 117. (Jones et al., 1985)
2. Southward E C, Tunnicliffe V, Black M. Revision of the species of Ridgeia from northeast Pacific hydrothermal vents, with a redescription of Ridgeia piscesae Jones (Pogonophora: Obturata= Vestimentifera)[J]. Canadian Journal of zoology, 1995, 73(2): 282-295. (Southward et al., 1995)

Distribution

Shepherd's Vent, Axial Seamount, Juande Fuca Ridge. Hydrothermal vents of Juan de Fuca Ridgeand northern Gorda Ridge


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Ridgeia piscesaeAnnelidatube wormsHydrothermal vent1,780-2,227the Juan de Fuca Ridge (47°57.00′ N, 129°5.82′ W)27915

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
R07B-5658.2MbContig2022JAODUO01Universite de MontrealPRJNA78643894.00 365.441-31,703

References
TitleJournalPubmed ID
Third-Generation Sequencing Reveals the Adaptive Role of the Epigenome in Three Deep-Sea PolychaetesMolecular Biology and Evolution37494294

Gene Information

<< First 19 20 21 22 23 24 25 26 27 28 Forward> Last>>        1581 pages in total

Gene IDDescription
KAK2193833.1MONOCARBOXYLATE TRANSPORTER
KAK2193834.1-
KAK2193835.1PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
KAK2193836.1-
KAK2193837.1-
KAK2193838.1N4BP1-RELATED
KAK2193839.1SOLUTE CARRIER FAMILY 35
KAK2193840.1NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
KAK2193841.1UNCHARACTERIZED
KAK2193842.1UNCHARACTERIZED
KAK2193843.1ZINC FINGER PROTEIN
KAK2193844.1ZINC FINGER PROTEIN
KAK2193845.1SH3 DOMAIN-BINDING GLUTAMIC ACID-RICH-LIKE PROTEIN
KAK2193846.1LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
KAK2193847.1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
KAK2193848.1-
KAK2193849.1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
KAK2193850.1BUCENTAUR RELATED
KAK2193851.1REVERSE TRANSCRIPTASES
KAK2193852.1-
TOP