The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032880221.1 | TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13 |
| XP_032880222.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| XP_032880223.1 | BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH |
| XP_032880224.1 | - |
| XP_032880225.1 | COLLAGEN ALPHA |
| XP_032880226.1 | COLLAGEN ALPHA |
| XP_032880227.1 | COLLAGEN ALPHA |
| XP_032880228.1 | TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13 |
| XP_032880229.1 | COLLAGEN ALPHA |
| XP_032880230.1 | COLLAGEN ALPHA |
| XP_032880231.1 | PHOSPHOFRUCTOKINASE |
| XP_032880232.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| XP_032880233.1 | UNCHARACTERIZED |
| XP_032880234.1 | UNCHARACTERIZED |
| XP_032880235.1 | UNCHARACTERIZED |
| XP_032880236.1 | TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13 |
| XP_032880237.1 | UNCHARACTERIZED |
| XP_032880238.1 | RESPIRATORY NITRATE REDUCTASE |
| XP_032880239.1 | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER |
| XP_032880240.1 | UNCHARACTERIZED |
| XP_032880241.1 | UNCHARACTERIZED |
| XP_032880242.1 | UNCHARACTERIZED |
| XP_032880243.1 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN |
| XP_032880244.1 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN |
| XP_032880245.1 | TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13 |
| XP_032880246.1 | PARTITIONING DEFECTIVE 3 RELATED |
| XP_032880247.1 | PARTITIONING DEFECTIVE 3 RELATED |
| XP_032880248.1 | CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN B |
| XP_032880249.1 | CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN B |
| XP_032880250.1 | CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN B |
| XP_032880251.1 | CYCLIN Y, ISOFORM A |
| XP_032880252.1 | CYCLIN Y, ISOFORM A |
| XP_032880253.1 | CYCLIN Y, ISOFORM A |
| XP_032880254.1 | HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN |
| XP_032880255.1 | HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN |
| XP_032880256.1 | FRIZZLED |
| XP_032880257.1 | PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN |
| XP_032880258.1 | PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN |
| XP_032880259.1 | PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN |
| XP_032880260.1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| XP_032880261.1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| XP_032880262.1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| XP_032880263.1 | MALATE DEHYDROGENASE |
| XP_032880264.1 | MALATE DEHYDROGENASE |
| XP_032880265.1 | SODIUM-BILE ACID COTRANSPORTER |
| XP_032880266.1 | MALATE DEHYDROGENASE |
| XP_032880267.1 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| XP_032880268.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032880269.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032880270.1 | TRAFFICKING KINESIN-BINDING PROTEIN |
