The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032879521.1 | COLLAGEN ALPHA |
| XP_032879522.1 | COLLAGEN ALPHA |
| XP_032879523.1 | PR DOMAIN ZINC FINGER PROTEIN |
| XP_032879524.1 | COLLAGEN ALPHA |
| XP_032879525.1 | COLLAGEN ALPHA |
| XP_032879526.1 | COLLAGEN ALPHA |
| XP_032879527.1 | COP9 SIGNALOSOME COMPLEX SUBUNIT 8 |
| XP_032879528.1 | G-PROTEIN COUPLED RECEPTOR 182 AND ESTROGEN RECEPTOR 1 |
| XP_032879529.1 | G-PROTEIN COUPLED RECEPTOR 182 AND ESTROGEN RECEPTOR 1 |
| XP_032879530.1 | UNCHARACTERIZED |
| XP_032879531.1 | UNCHARACTERIZED |
| XP_032879532.1 | SECRETED PHOSPHOPROTEIN 24 |
| XP_032879533.1 | SECRETED PHOSPHOPROTEIN 24 |
| XP_032879534.1 | SECRETED PHOSPHOPROTEIN 24 |
| XP_032879535.1 | SECRETED PHOSPHOPROTEIN 24 |
| XP_032879536.1 | SECRETED PHOSPHOPROTEIN 24 |
| XP_032879537.1 | SECRETED PHOSPHOPROTEIN 24 |
| XP_032879538.1 | SECRETED PHOSPHOPROTEIN 24 |
| XP_032879539.1 | SECRETED PHOSPHOPROTEIN 24 |
| XP_032879540.1 | NEURON-DERIVED NEUROTROPHIC FACTOR |
| XP_032879541.1 | SECRETED PHOSPHOPROTEIN 24 |
| XP_032879542.1 | SECRETED PHOSPHOPROTEIN 24 |
| XP_032879543.1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032879544.1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032879545.1 | LONGEVITY ASSURANCE FACTOR 1 LAG1 |
| XP_032879546.1 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| XP_032879547.1 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| XP_032879548.1 | KINETOCHORE PROTEIN SPC25-RELATED |
| XP_032879549.1 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| XP_032879550.1 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| XP_032879551.1 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| XP_032879552.1 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| XP_032879553.1 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| XP_032879554.1 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
| XP_032879555.1 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
| XP_032879556.1 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
| XP_032879557.1 | TNFAIP3-INTERACTING PROTEIN COILED COIL FAMILY MEMBER |
| XP_032879558.1 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
| XP_032879559.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED |
| XP_032879560.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED |
| XP_032879561.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 89 |
| XP_032879562.1 | ATP SYNTHASE |
| XP_032879563.1 | TNFAIP3-INTERACTING PROTEIN COILED COIL FAMILY MEMBER |
| XP_032879564.1 | INTEGRIN BETA SUBUNIT |
| XP_032879565.1 | HEART DEVELOPMENT PROTEIN WITH EGF-LIKE DOMAINS 1 |
| XP_032879566.1 | HEART DEVELOPMENT PROTEIN WITH EGF-LIKE DOMAINS 1 |
| XP_032879567.1 | HEART DEVELOPMENT PROTEIN WITH EGF-LIKE DOMAINS 1 |
| XP_032879568.1 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
| XP_032879569.1 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
| XP_032879570.1 | TNFAIP3-INTERACTING PROTEIN COILED COIL FAMILY MEMBER |
