Bathymodiolus brooksi is a species of deep-sea mussel in the family Mytilidae, commonly found in sulfide- and methane-rich hydrocarbon seeps in the Gulf of Mexico. This species harbors symbiotic bacteria in its gills, which enable it to thrive in extreme environments by oxidizing methane or hydrogen sulfide to produce organic compounds. Bathymodiolus brooksi plays a crucial role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Mytilida (Order); Mytiloidea (Superfamily); Modiolidae (Family); Bathymodiolinae (Subfamily); Bathymodiolus (Genus); Bathymodiolus brooksi (Species)
Bathymodiolus brooksi Gustafson, R. D. Turner, Lutz & Vrijenhoek, 1998
1. Gustafson R G, Turner R D, Lutz R A, et al. A new genus and five new species of mussels (Bivalvia, Mytilidae) from deep-sea sulfide/hydrocarbon seeps in the Gulf of Mexico[J]. Malacologia, 1998, 40(1-2): 63-112. (Gustafson et al., 1998)
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathymodiolus brooksi | Mollusca | - | Hydrothermal vent | 1,073-3,314 | cold seep location GC853 at the northern Gulf of Mexico (28.1237, −89.1404) | 206348 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| xbBatBroo1.1 | 2 Gb | Chromosome | 2023 | CAVMGF01 | WELLCOME SANGER INSTITUTE | PRJEB70452 | 94.00 | 130,400/2,900 | 35 | - | 34,012 |
| Gene ID | Description |
|---|---|
| ENSQHTP00000004562.1 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
| ENSQHTP00000004563.1 | DUF3504 DOMAIN-CONTAINING PROTEIN |
| ENSQHTP00000004564.1 | SPHINGOMYELIN PHOSPHODIESTERASE |
| ENSQHTP00000004565.1 | KELCH PROTEIN |
| ENSQHTP00000004566.1 | - |
| ENSQHTP00000004567.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| ENSQHTP00000004568.1 | 50S RIBOSOMAL PROTEIN L15 |
| ENSQHTP00000004569.1 | TRANSCRIPTION INTERMEDIARY FACTOR |
| ENSQHTP00000004570.1 | - |
| ENSQHTP00000004571.1 | SPHINGOMYELIN PHOSPHODIESTERASE |
| ENSQHTP00000004572.1 | KELCH PROTEIN |
| ENSQHTP00000004573.1 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| ENSQHTP00000004574.1 | - |
| ENSQHTP00000004575.1 | NITROGEN PERMEASE REGULATOR 2/TUMOR SUPPRESSOR CANDIDATE 4 |
| ENSQHTP00000004576.1 | DYNEIN HEAVY CHAIN |
| ENSQHTP00000004577.1 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED |
| ENSQHTP00000004578.1 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| ENSQHTP00000004579.1 | - |
| ENSQHTP00000004580.1 | - |
| ENSQHTP00000004581.1 | UNCHARACTERIZED |
