About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g17513TGF-BETA FAMILY
Chiridota_g17514
Chiridota_g17515
Chiridota_g17516SPINDLE AND CENTRIOLE ASSOCIATED PROTEIN 1 SPICE1
Chiridota_g17517INTEGRAL MEMBRANE PROTEIN GPR177
Chiridota_g17518
Chiridota_g17519
Chiridota_g1752
Chiridota_g17520
Chiridota_g17521
Chiridota_g17522UNCHARACTERIZED
Chiridota_g17523CALRETICULIN AND CALNEXIN
Chiridota_g17524
Chiridota_g17525PROTEIN CBG10425
Chiridota_g17526
Chiridota_g17527
Chiridota_g17528
Chiridota_g17529
Chiridota_g1753RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
Chiridota_g17530
Chiridota_g17531SMALL NUCLEAR RIBONUCLEOPROTEIN SM
Chiridota_g17532
Chiridota_g17533METALLOPROTEASE TIKI
Chiridota_g17534PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
Chiridota_g17535ATP-DEPENDENT DNA HELICASE
Chiridota_g17536EG:EG0003.4 PROTEIN-RELATED
Chiridota_g17537
Chiridota_g17538
Chiridota_g17539EG:EG0003.4 PROTEIN-RELATED
Chiridota_g1754PHD-TYPE DOMAIN-CONTAINING PROTEIN
Chiridota_g17540
Chiridota_g17541COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Chiridota_g17542
Chiridota_g17543GLYCOPROTEIN HORMONE RECEPTOR
Chiridota_g17544VITELLOGENIN-RELATED
Chiridota_g17545
Chiridota_g17546EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
Chiridota_g17547
Chiridota_g17548
Chiridota_g17549
Chiridota_g1755ENDONUCLEASE-RELATED
Chiridota_g17550UNCHARACTERIZED
Chiridota_g17551PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
Chiridota_g17552SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG
Chiridota_g17553ZINC FINGER PROTEIN
Chiridota_g17554
Chiridota_g17555ZINC FINGER PROTEIN
Chiridota_g17556
Chiridota_g17557
Chiridota_g17558
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