Bathymodiolus brooksi is a species of deep-sea mussel in the family Mytilidae, commonly found in sulfide- and methane-rich hydrocarbon seeps in the Gulf of Mexico. This species harbors symbiotic bacteria in its gills, which enable it to thrive in extreme environments by oxidizing methane or hydrogen sulfide to produce organic compounds. Bathymodiolus brooksi plays a crucial role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathymodiolus brooksi | Mollusca | - | Hydrothermal vent | 1,073-3,314 | cold seep location GC853 at the northern Gulf of Mexico (28.1237, −89.1404) | 206348 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| xbBatBroo1.1 | 2 Gb | Chromosome | 2023 | CAVMGF01 | WELLCOME SANGER INSTITUTE | PRJEB70452 | - | 34,012 |
| Gene ID | Description |
|---|---|
| ENSQHTP00000008202.1 | PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER |
| ENSQHTP00000008203.1 | INTEGRIN BETA SUBUNIT |
| ENSQHTP00000008204.1 | COPPER AMINE OXIDASE |
| ENSQHTP00000008205.1 | SI:CH211-156B7.4 |
| ENSQHTP00000008206.1 | GH03947P |
| ENSQHTP00000008207.1 | E3 UBIQUITIN-PROTEIN LIGASE RNF165 |
| ENSQHTP00000008208.1 | L-CYSTEINE DESULFHYDRASE |
| ENSQHTP00000008209.1 | SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D |
| ENSQHTP00000008210.1 | DELETED IN LUNG AND ESOPHAGEAL CANCER PROTEIN 1 |
| ENSQHTP00000008211.1 | |
| ENSQHTP00000008212.1 | |
| ENSQHTP00000008213.1 | TRANSCRIPTIONAL ADAPTER 1 |
| ENSQHTP00000008214.1 | |
| ENSQHTP00000008215.1 | TETRASPANIN |
| ENSQHTP00000008216.1 | RING/U-BOX SUPERFAMILY PROTEIN |
| ENSQHTP00000008217.1 | PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER |
| ENSQHTP00000008218.1 | |
| ENSQHTP00000008219.1 | |
| ENSQHTP00000008220.1 | SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D |
| ENSQHTP00000008221.1 | |
| ENSQHTP00000008222.1 | |
| ENSQHTP00000008223.1 | MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN |
| ENSQHTP00000008224.1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| ENSQHTP00000008225.1 | RING/U-BOX SUPERFAMILY PROTEIN |
| ENSQHTP00000008226.1 | PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER |
| ENSQHTP00000008227.1 | |
| ENSQHTP00000008228.1 | SOLUTE CARRIER FAMILY 25 MEMBER 44 |
| ENSQHTP00000008229.1 | |
| ENSQHTP00000008230.1 | |
| ENSQHTP00000008231.1 | |
| ENSQHTP00000008232.1 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| ENSQHTP00000008233.1 | PYRUVATE KINASE |
| ENSQHTP00000008234.1 | |
| ENSQHTP00000008235.1 | |
| ENSQHTP00000008236.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED |
| ENSQHTP00000008237.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| ENSQHTP00000008238.1 | BONUS, ISOFORM C-RELATED |
| ENSQHTP00000008239.1 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| ENSQHTP00000008240.1 | |
| ENSQHTP00000008241.1 | ANKYRIN REPEAT PROTEIN |
| ENSQHTP00000008242.1 | PYRUVATE KINASE |
| ENSQHTP00000008243.1 | PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER |
| ENSQHTP00000008244.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| ENSQHTP00000008245.1 | |
| ENSQHTP00000008246.1 | SYNAPTOBREVIN FAMILY MEMBER |
| ENSQHTP00000008247.1 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1 |
| ENSQHTP00000008248.1 | PDF RECEPTOR-LIKE PROTEIN-RELATED |
| ENSQHTP00000008249.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| ENSQHTP00000008250.1 | PYRUVATE KINASE |
| ENSQHTP00000008251.1 | ZINC FINGER PROTEIN 200 |
