About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g17153RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Chiridota_g17154
Chiridota_g17155
Chiridota_g17156INACTIVE TYROSINE-PROTEIN KINASE 7
Chiridota_g17157
Chiridota_g17158CXC DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g17159
Chiridota_g1716REVERSE TRANSCRIPTASES
Chiridota_g17160POL PROTEIN
Chiridota_g17161
Chiridota_g17162
Chiridota_g17163
Chiridota_g17164
Chiridota_g17165RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Chiridota_g17166RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Chiridota_g17167LYSINE-SPECIFIC DEMETHYLASE
Chiridota_g17168HOOK PROTEINS
Chiridota_g17169-
Chiridota_g1717L1 TRANSPOSABLE ELEMENT-RELATED
Chiridota_g17170HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2
Chiridota_g17171
Chiridota_g17172
Chiridota_g17173
Chiridota_g17174
Chiridota_g17175
Chiridota_g17176-
Chiridota_g17177
Chiridota_g17178
Chiridota_g17179
Chiridota_g1718REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g17180RAN BINDING PROTEIN
Chiridota_g17181TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED
Chiridota_g17182
Chiridota_g17183
Chiridota_g17184
Chiridota_g17185
Chiridota_g17186
Chiridota_g17187
Chiridota_g17188NADPH OXIDASE
Chiridota_g17189TYROSINE-PROTEIN KINASE RECEPTOR
Chiridota_g1719
Chiridota_g17190ARRESTIN DOMAIN CONTAINING PROTEIN
Chiridota_g17191U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4
Chiridota_g17192RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Chiridota_g17193
Chiridota_g17194PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE
Chiridota_g17195DISCS LARGE
Chiridota_g17196
Chiridota_g17197
Chiridota_g17198OLIGORIBONUCLEASE, MITOCHONDRIAL
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