About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.

Classification

Animalia (Kingdom); Cnidaria (Phylum); Anthozoa (Subphylum); Hexacorallia (Class); Scleractinia (Order); Vacatina (Suborder); Caryophylliidae (Family); Lophelia (Genus); Lophelia pertusa (Species)

Original Name

Madrepora pertusa Linnaeus, 1758

Key Reference Paper

1. Linnaeus C. Systema Naturae per regna tria naturae, secundum classes, ordines, genera, species; cum characteribus, differentiis, synonymis, locis[M]. apud JB Delamolliere, 1789. (Linnaeus et al., 1789)

Distribution

Nova Scotia south to New Jersey. Depth range 39-2775 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90 1,600/438.639.457.3737,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 1520 1521 1522 1523 1524 1525 1526 1527 1528 1529 Forward> Last>>        1875 pages in total

Gene IDDescription
OS493_032954-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_032955-T1-
OS493_032956-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_032958-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_032959-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_032960-T1GUANYLATE BINDING PROTEIN
OS493_032961-T1GUANYLATE BINDING PROTEIN
OS493_032962-T1GUANYLATE BINDING PROTEIN
OS493_032963-T1NXPE FAMILY MEMBER
OS493_032965-T1CWF19, CELL CYCLE CONTROL PROTEIN
OS493_032966-T140S RIBOSOMAL PROTEIN S11 FAMILY MEMBER
OS493_032967-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_032968-T1URACIL-DNA GLYCOSYLASE
OS493_032969-T1URACIL-DNA GLYCOSYLASE
OS493_032970-T1MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
OS493_032971-T1WD40 REPEAT PROTEIN
OS493_032972-T1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
OS493_032973-T1-
OS493_032974-T1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
OS493_032975-T1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
TOP