About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g10628SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Chiridota_g10629
Chiridota_g1063
Chiridota_g10630REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g10631
Chiridota_g10632
Chiridota_g10633
Chiridota_g10634
Chiridota_g10635
Chiridota_g10636
Chiridota_g10637
Chiridota_g10638
Chiridota_g10639
Chiridota_g1064
Chiridota_g10640
Chiridota_g10641
Chiridota_g10642KREMEN PROTEIN
Chiridota_g10643SRCR DOMAIN-CONTAINING PROTEIN
Chiridota_g10644CYTOCHROME P450 508A4-RELATED
Chiridota_g10645CEREBRAL CAVERNOUS MALFORMATIONS PROTEIN 2 HOMOLOG
Chiridota_g10646
Chiridota_g10647TRANSMEMBRANE PROTEIN 68
Chiridota_g10648XK-RELATED PROTEIN
Chiridota_g10649
Chiridota_g1065
Chiridota_g10650INTIMAL THICKNESS RECEPTOR-RELATED
Chiridota_g10651
Chiridota_g10652
Chiridota_g10653
Chiridota_g10654
Chiridota_g10655L-THREONINE 3-DEHYDROGENASE
Chiridota_g10656
Chiridota_g10657CYSTEINE PROTEASE FAMILY C1-RELATED
Chiridota_g10658TRANSCRIPTION INITIATION FACTOR TFIID
Chiridota_g1065940S RIBOSOMAL PROTEIN S21
Chiridota_g1066
Chiridota_g10660AGAP005440-PA
Chiridota_g10661VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Chiridota_g10662JOUBERIN
Chiridota_g10663TRANSCRIPTION FACTOR AP-2
Chiridota_g10664NUCLEAR PORE COMPLEX PROTEIN NUP
Chiridota_g10665
Chiridota_g10666IMPORTIN-7, 8, 11
Chiridota_g10667
Chiridota_g10668TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
Chiridota_g10669DEATH DOMAIN-CONTAINING PROTEIN
Chiridota_g1067
Chiridota_g10670DEATH DOMAIN-CONTAINING PROTEIN
Chiridota_g10671ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, MITOCHONDRIAL
Chiridota_g10672DNA PRIMASE LARGE SUBUNIT
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