Bathymodiolus brooksi is a species of deep-sea mussel in the family Mytilidae, commonly found in sulfide- and methane-rich hydrocarbon seeps in the Gulf of Mexico. This species harbors symbiotic bacteria in its gills, which enable it to thrive in extreme environments by oxidizing methane or hydrogen sulfide to produce organic compounds. Bathymodiolus brooksi plays a crucial role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Mytilida (Order); Mytiloidea (Superfamily); Modiolidae (Family); Bathymodiolinae (Subfamily); Bathymodiolus (Genus); Bathymodiolus brooksi (Species)
Bathymodiolus brooksi Gustafson, R. D. Turner, Lutz & Vrijenhoek, 1998
1. Gustafson R G, Turner R D, Lutz R A, et al. A new genus and five new species of mussels (Bivalvia, Mytilidae) from deep-sea sulfide/hydrocarbon seeps in the Gulf of Mexico[J]. Malacologia, 1998, 40(1-2): 63-112. (Gustafson et al., 1998)
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathymodiolus brooksi | Mollusca | - | Hydrothermal vent | 1,073-3,314 | cold seep location GC853 at the northern Gulf of Mexico (28.1237, −89.1404) | 206348 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| xbBatBroo1.1 | 2 Gb | Chromosome | 2023 | CAVMGF01 | WELLCOME SANGER INSTITUTE | PRJEB70452 | 94.00 | 130,400/2,900 | 35 | - | 34,012 |
| Gene ID | Description |
|---|---|
| ENSQHTP00000029482.1 | CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN A |
| ENSQHTP00000029483.1 | - |
| ENSQHTP00000029484.1 | FGF RECEPTOR ACTIVATING PROTEIN 1 |
| ENSQHTP00000029485.1 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| ENSQHTP00000029486.1 | PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN |
| ENSQHTP00000029487.1 | SUGAR HYDROLASE-RELATED |
| ENSQHTP00000029488.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 11 |
| ENSQHTP00000029489.1 | ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS |
| ENSQHTP00000029490.1 | STROMAL INTERACTION MOLECULE HOMOLOG |
| ENSQHTP00000029491.1 | FGF RECEPTOR ACTIVATING PROTEIN 1 |
| ENSQHTP00000029492.1 | RAD54-LIKE |
| ENSQHTP00000029493.1 | PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN |
| ENSQHTP00000029494.1 | EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 |
| ENSQHTP00000029495.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| ENSQHTP00000029496.1 | - |
| ENSQHTP00000029497.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 11 |
| ENSQHTP00000029498.1 | - |
| ENSQHTP00000029499.1 | STROMAL INTERACTION MOLECULE HOMOLOG |
| ENSQHTP00000029500.1 | FGF RECEPTOR ACTIVATING PROTEIN 1 |
| ENSQHTP00000029501.1 | - |
