Bathymodiolus brooksi is a species of deep-sea mussel in the family Mytilidae, commonly found in sulfide- and methane-rich hydrocarbon seeps in the Gulf of Mexico. This species harbors symbiotic bacteria in its gills, which enable it to thrive in extreme environments by oxidizing methane or hydrogen sulfide to produce organic compounds. Bathymodiolus brooksi plays a crucial role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Mytilida (Order); Mytiloidea (Superfamily); Modiolidae (Family); Bathymodiolinae (Subfamily); Bathymodiolus (Genus); Bathymodiolus brooksi (Species)
Bathymodiolus brooksi Gustafson, R. D. Turner, Lutz & Vrijenhoek, 1998
1. Gustafson R G, Turner R D, Lutz R A, et al. A new genus and five new species of mussels (Bivalvia, Mytilidae) from deep-sea sulfide/hydrocarbon seeps in the Gulf of Mexico[J]. Malacologia, 1998, 40(1-2): 63-112. (Gustafson et al., 1998)
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathymodiolus brooksi | Mollusca | - | Hydrothermal vent | 1,073-3,314 | cold seep location GC853 at the northern Gulf of Mexico (28.1237, −89.1404) | 206348 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| xbBatBroo1.1 | 2 Gb | Chromosome | 2023 | CAVMGF01 | WELLCOME SANGER INSTITUTE | PRJEB70452 | 94.00 | 130,400/2,900 | 35 | - | 34,012 |
| Gene ID | Description |
|---|---|
| ENSQHTP00000002862.1 | SLIT-ROBO RHO GTPASE ACTIVATING PROTEIN |
| ENSQHTP00000002863.1 | PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN |
| ENSQHTP00000002864.1 | - |
| ENSQHTP00000002865.1 | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT |
| ENSQHTP00000002866.1 | CRSP70 |
| ENSQHTP00000002867.1 | - |
| ENSQHTP00000002868.1 | SOLUTE CARRIER FAMILY 35 |
| ENSQHTP00000002869.1 | MOLTING PROTEIN MLT-4 |
| ENSQHTP00000002870.1 | - |
| ENSQHTP00000002871.1 | - |
| ENSQHTP00000002872.1 | TYROSINE-PROTEIN KINASE |
| ENSQHTP00000002873.1 | VACUOLAR PROTEIN SORTING VPS16 |
| ENSQHTP00000002874.1 | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT |
| ENSQHTP00000002875.1 | FIDO DOMAIN-CONTAINING PROTEIN DDB_G0283145 |
| ENSQHTP00000002876.1 | ZINC FINGER PROTEIN 142 |
| ENSQHTP00000002877.1 | SOLUTE CARRIER FAMILY 35 |
| ENSQHTP00000002878.1 | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED |
| ENSQHTP00000002879.1 | TRAF3-INTERACTING PROTEIN 1 |
| ENSQHTP00000002880.1 | FMRFAMIDE-RELATED PEPTIDES |
| ENSQHTP00000002881.1 | TYROSINE-PROTEIN KINASE |
