Bathymodiolus brooksi is a species of deep-sea mussel in the family Mytilidae, commonly found in sulfide- and methane-rich hydrocarbon seeps in the Gulf of Mexico. This species harbors symbiotic bacteria in its gills, which enable it to thrive in extreme environments by oxidizing methane or hydrogen sulfide to produce organic compounds. Bathymodiolus brooksi plays a crucial role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Mytilida (Order); Mytiloidea (Superfamily); Modiolidae (Family); Bathymodiolinae (Subfamily); Bathymodiolus (Genus); Bathymodiolus brooksi (Species)
Bathymodiolus brooksi Gustafson, R. D. Turner, Lutz & Vrijenhoek, 1998
1. Gustafson R G, Turner R D, Lutz R A, et al. A new genus and five new species of mussels (Bivalvia, Mytilidae) from deep-sea sulfide/hydrocarbon seeps in the Gulf of Mexico[J]. Malacologia, 1998, 40(1-2): 63-112. (Gustafson et al., 1998)
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathymodiolus brooksi | Mollusca | - | Hydrothermal vent | 1,073-3,314 | cold seep location GC853 at the northern Gulf of Mexico (28.1237, −89.1404) | 206348 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| xbBatBroo1.1 | 2 Gb | Chromosome | 2023 | CAVMGF01 | WELLCOME SANGER INSTITUTE | PRJEB70452 | 94.00 | 130,400/2,900 | 35 | - | 34,012 |
| Gene ID | Description |
|---|---|
| ENSQHTP00000028322.1 | ACYL-COA DEHYDROGENASE |
| ENSQHTP00000028323.1 | DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED |
| ENSQHTP00000028324.1 | EF HAND DOMAIN FAMILY A1,A2-RELATED |
| ENSQHTP00000028325.1 | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| ENSQHTP00000028326.1 | SH2-SH3 ADAPTOR PROTEIN-RELATED |
| ENSQHTP00000028327.1 | MATRIX METALLOPROTEINASE |
| ENSQHTP00000028328.1 | DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED |
| ENSQHTP00000028329.1 | METABOTROPIC GLUTAMATE RECEPTOR |
| ENSQHTP00000028330.1 | P2X PURINOCEPTOR |
| ENSQHTP00000028331.1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
| ENSQHTP00000028332.1 | 60S RIBOSOMAL PROTEIN L36A/L44 |
| ENSQHTP00000028333.1 | GENE, 17359-RELATED |
| ENSQHTP00000028334.1 | METHYLTRANSF_11 DOMAIN-CONTAINING PROTEIN |
| ENSQHTP00000028335.1 | - |
| ENSQHTP00000028336.1 | MATRIX METALLOPROTEINASE |
| ENSQHTP00000028337.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| ENSQHTP00000028338.1 | CHCHD1 |
| ENSQHTP00000028339.1 | TRANSDUCER OF ERBB2 TOB |
| ENSQHTP00000028340.1 | 60S RIBOSOMAL PROTEIN L36A/L44 |
| ENSQHTP00000028341.1 | P2X PURINOCEPTOR |
