Lamellibrachia columna is a species of tube worm in the family Siboglinidae, found in deep-sea hydrothermal vents and cold seep ecosystems. This species thrives in extreme environments by relying on a symbiotic relationship with sulfide-oxidizing bacteria housed in its trophosome, a specialized organ. These bacteria convert hydrogen sulfide into organic compounds, providing the worm with essential nutrients. Lamellibrachia columna plays a vital role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia columna | Annelida | - | Cold seep | 810-1,870 | cold seeps off the east coast of the North Island of New Zealand | 53616 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| wsLamColu1.1 | 879.7Mb | Chromosome | 2023 | CAVLEN01 | WELLCOME SANGER INSTITUTE | PRJEB68353 | - | 32,318 |
| Gene ID | Description |
|---|---|
| ENSZWYP00000000652.1 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
| ENSZWYP00000000653.1 | |
| ENSZWYP00000000654.1 | |
| ENSZWYP00000000655.1 | L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+)) |
| ENSZWYP00000000656.1 | 3-KETO-STEROID REDUCTASE |
| ENSZWYP00000000657.1 | PROTEIN CBG26694 |
| ENSZWYP00000000658.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| ENSZWYP00000000659.1 | CYCLIN-DEPENDENT KINASE INHIBITOR 1 |
| ENSZWYP00000000660.1 | CHOLINE/ETHANOALAMINE KINASE |
| ENSZWYP00000000661.1 | MATING RESPONSE PROTEIN POI2 |
| ENSZWYP00000000662.1 | ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING |
| ENSZWYP00000000663.1 | PINSTRIPE, ISOFORM A |
| ENSZWYP00000000664.1 | CHOLINE/ETHANOALAMINE KINASE |
| ENSZWYP00000000665.1 | FMRFAMIDE RECEPTOR-RELATED |
| ENSZWYP00000000666.1 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
| ENSZWYP00000000667.1 | ASPARAGINE SYNTHETASE |
| ENSZWYP00000000668.1 | |
| ENSZWYP00000000669.1 | ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING |
| ENSZWYP00000000670.1 | PINSTRIPE, ISOFORM A |
| ENSZWYP00000000671.1 | |
| ENSZWYP00000000672.1 | DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED |
| ENSZWYP00000000673.1 | EBNA2 BINDING PROTEIN P100 |
| ENSZWYP00000000674.1 | |
| ENSZWYP00000000675.1 | N-MYRISTOYL TRANSFERASE |
| ENSZWYP00000000676.1 | |
| ENSZWYP00000000677.1 | ASPARAGINE SYNTHETASE |
| ENSZWYP00000000678.1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
| ENSZWYP00000000679.1 | FORMIN-LIKE PROTEIN |
| ENSZWYP00000000680.1 | |
| ENSZWYP00000000681.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| ENSZWYP00000000682.1 | |
| ENSZWYP00000000683.1 | PINSTRIPE, ISOFORM A |
| ENSZWYP00000000684.1 | EBNA2 BINDING PROTEIN P100 |
| ENSZWYP00000000685.1 | |
| ENSZWYP00000000686.1 | |
| ENSZWYP00000000687.1 | BCL-2 RELATED |
| ENSZWYP00000000688.1 | DFG10 PROTEIN |
| ENSZWYP00000000689.1 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
| ENSZWYP00000000690.1 | |
| ENSZWYP00000000691.1 | |
| ENSZWYP00000000692.1 | LD11652P |
| ENSZWYP00000000693.1 | DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED |
| ENSZWYP00000000694.1 | |
| ENSZWYP00000000695.1 | MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER |
| ENSZWYP00000000696.1 | SOLUTE CARRIER FAMILY 22 MEMBER |
| ENSZWYP00000000697.1 | |
| ENSZWYP00000000698.1 | EBNA2 BINDING PROTEIN P100 |
| ENSZWYP00000000699.1 | LD11652P |
| ENSZWYP00000000700.1 | FCH AND DOUBLE SH3 DOMAINS PROTEIN |
| ENSZWYP00000000701.1 | TGF-BETA FAMILY |
