About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.

Classification

Animalia (Kingdom); Cnidaria (Phylum); Anthozoa (Subphylum); Hexacorallia (Class); Scleractinia (Order); Vacatina (Suborder); Caryophylliidae (Family); Lophelia (Genus); Lophelia pertusa (Species)

Original Name

Madrepora pertusa Linnaeus, 1758

Key Reference Paper

1. Linnaeus C. Systema Naturae per regna tria naturae, secundum classes, ordines, genera, species; cum characteribus, differentiis, synonymis, locis[M]. apud JB Delamolliere, 1789. (Linnaeus et al., 1789)

Distribution

Nova Scotia south to New Jersey. Depth range 39-2775 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90 1,600/438.639.457.3737,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 1243 1244 1245 1246 1247 1248 1249 1250 1251 1252 Forward> Last>>        1875 pages in total

Gene IDDescription
OS493_026877-T1DEATH DOMAIN-CONTAINING PROTEIN
OS493_026878-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_026879-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_026880-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_026881-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_026882-T1N-ACETYLGLUCOSAMINYLTRANSFERASE VI
OS493_026883-T1N-ACETYLGLUCOSAMINYLTRANSFERASE VI
OS493_026884-T1N-ACETYLGLUCOSAMINYLTRANSFERASE VI
OS493_026885-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
OS493_026886-T1-
OS493_026887-T1-
OS493_026888-T1-
OS493_026889-T1-
OS493_026890-T1UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN
OS493_026891-T1MEDIATOR COMPLEX SUBUNIT
OS493_026892-T1MEDIATOR COMPLEX SUBUNIT
OS493_026893-T1MEDIATOR COMPLEX SUBUNIT
OS493_026894-T1-
OS493_026895-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
OS493_026896-T1-
TOP