About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g15308
Chiridota_g15309
Chiridota_g1531
Chiridota_g15310MITOFILIN
Chiridota_g15311-
Chiridota_g15312URACIL-DNA GLYCOSYLASE
Chiridota_g15313
Chiridota_g15314
Chiridota_g15315
Chiridota_g15316
Chiridota_g15317
Chiridota_g15318
Chiridota_g15319
Chiridota_g1532
Chiridota_g15320ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Chiridota_g15321RTDR1
Chiridota_g15322THO COMPLEX SUBUNIT 3 THO3
Chiridota_g15323
Chiridota_g15324PEPTIDASE S8
Chiridota_g15325BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Chiridota_g15326ACTIN
Chiridota_g15327
Chiridota_g15328HOMEOBOX PROTEIN NKX
Chiridota_g15329U4/U6.U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 27 KDA PROTEIN
Chiridota_g1533
Chiridota_g15330DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED
Chiridota_g15331
Chiridota_g15332MITOCHONDRIAL DIVISION PROTEIN 1-RELATED
Chiridota_g15333
Chiridota_g15334
Chiridota_g15335
Chiridota_g15336D-DOPACHROME DECARBOXYLASE
Chiridota_g15337
Chiridota_g15338ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Chiridota_g15339THAP DOMAIN-CONTAINING
Chiridota_g1534
Chiridota_g15340
Chiridota_g15341UNCHARACTERIZED
Chiridota_g15342EXOCYST COMPLEX COMPONENT 4
Chiridota_g15343UBIQUITIN-LIKE DOMAIN-CONTAINING CTD PHOSPHATASE 1
Chiridota_g15344
Chiridota_g15345TRANSMEMBRANE PROTEIN 127
Chiridota_g15346ACETYLTRANSFERASE
Chiridota_g15347
Chiridota_g15348
Chiridota_g15349
Chiridota_g1535
Chiridota_g15350
Chiridota_g15351
Chiridota_g15352
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