Bathymodiolus brooksi is a species of deep-sea mussel in the family Mytilidae, commonly found in sulfide- and methane-rich hydrocarbon seeps in the Gulf of Mexico. This species harbors symbiotic bacteria in its gills, which enable it to thrive in extreme environments by oxidizing methane or hydrogen sulfide to produce organic compounds. Bathymodiolus brooksi plays a crucial role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Mytilida (Order); Mytiloidea (Superfamily); Modiolidae (Family); Bathymodiolinae (Subfamily); Bathymodiolus (Genus); Bathymodiolus brooksi (Species)
Bathymodiolus brooksi Gustafson, R. D. Turner, Lutz & Vrijenhoek, 1998
1. Gustafson R G, Turner R D, Lutz R A, et al. A new genus and five new species of mussels (Bivalvia, Mytilidae) from deep-sea sulfide/hydrocarbon seeps in the Gulf of Mexico[J]. Malacologia, 1998, 40(1-2): 63-112. (Gustafson et al., 1998)
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathymodiolus brooksi | Mollusca | - | Hydrothermal vent | 1,073-3,314 | cold seep location GC853 at the northern Gulf of Mexico (28.1237, −89.1404) | 206348 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| xbBatBroo1.1 | 2 Gb | Chromosome | 2023 | CAVMGF01 | WELLCOME SANGER INSTITUTE | PRJEB70452 | 94.00 | 130,400/2,900 | 35 | - | 34,012 |
| Gene ID | Description |
|---|---|
| ENSQHTP00000023322.1 | RHO FAMILY GTPASE |
| ENSQHTP00000023323.1 | CONNECTIVE TISSUE GROWTH FACTOR-RELATED |
| ENSQHTP00000023324.1 | VACUOLAR IMPORT AND DEGRADATION PROTEIN 24 |
| ENSQHTP00000023325.1 | NF-KAPPA-B INHIBITOR ALPHA |
| ENSQHTP00000023326.1 | SOLUTE CARRIER FAMILY 22 MEMBER |
| ENSQHTP00000023327.1 | GAMMA-GLUTAMYLTRANSPEPTIDASE (AFU_ORTHOLOGUE AFUA_4G13580) |
| ENSQHTP00000023328.1 | RIKEN CDNA 6820408C15 |
| ENSQHTP00000023329.1 | EPSIN/ENT-RELATED |
| ENSQHTP00000023330.1 | UNCHARACTERIZED |
| ENSQHTP00000023331.1 | DNA POLYMERASE TYPE-X FAMILY MEMBER |
| ENSQHTP00000023332.1 | U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT |
| ENSQHTP00000023333.1 | PIKACHURIN-LIKE PROTEIN |
| ENSQHTP00000023334.1 | UNCHARACTERIZED |
| ENSQHTP00000023335.1 | RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN |
| ENSQHTP00000023336.1 | - |
| ENSQHTP00000023337.1 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| ENSQHTP00000023338.1 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
| ENSQHTP00000023339.1 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
| ENSQHTP00000023340.1 | U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT |
| ENSQHTP00000023341.1 | UNCHARACTERIZED |
