Bathymodiolus brooksi is a species of deep-sea mussel in the family Mytilidae, commonly found in sulfide- and methane-rich hydrocarbon seeps in the Gulf of Mexico. This species harbors symbiotic bacteria in its gills, which enable it to thrive in extreme environments by oxidizing methane or hydrogen sulfide to produce organic compounds. Bathymodiolus brooksi plays a crucial role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathymodiolus brooksi | Mollusca | - | Hydrothermal vent | 1,073-3,314 | cold seep location GC853 at the northern Gulf of Mexico (28.1237, −89.1404) | 206348 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| xbBatBroo1.1 | 2 Gb | Chromosome | 2023 | CAVMGF01 | WELLCOME SANGER INSTITUTE | PRJEB70452 | - | 34,012 |
| Gene ID | Description |
|---|---|
| ENSQHTP00000005752.1 | SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS |
| ENSQHTP00000005753.1 | DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED |
| ENSQHTP00000005754.1 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
| ENSQHTP00000005755.1 | 60 KDA RIBONUCLEOPROTEIN SSA/RO |
| ENSQHTP00000005756.1 | ETS |
| ENSQHTP00000005757.1 | DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED |
| ENSQHTP00000005758.1 | RNA-BINDING PROTEIN |
| ENSQHTP00000005759.1 | NADP-SPECIFIC ISOCITRATE DEHYDROGENASE |
| ENSQHTP00000005760.1 | ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN |
| ENSQHTP00000005761.1 | RIBONUCLEASE P SUBUNIT P30 |
| ENSQHTP00000005762.1 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
| ENSQHTP00000005763.1 | GLYCINE DEHYDROGENASE, DECARBOXYLATING |
| ENSQHTP00000005764.1 | |
| ENSQHTP00000005765.1 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
| ENSQHTP00000005766.1 | NADP-SPECIFIC ISOCITRATE DEHYDROGENASE |
| ENSQHTP00000005767.1 | ETS |
| ENSQHTP00000005768.1 | TOLL-LIKE RECEPTOR |
| ENSQHTP00000005769.1 | |
| ENSQHTP00000005770.1 | RIBONUCLEASE P SUBUNIT P30 |
| ENSQHTP00000005771.1 | USP DOMAIN-CONTAINING PROTEIN |
| ENSQHTP00000005772.1 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 7 |
| ENSQHTP00000005773.1 | |
| ENSQHTP00000005774.1 | CHOLINE/ETHANOALAMINE KINASE |
| ENSQHTP00000005775.1 | USP DOMAIN-CONTAINING PROTEIN |
| ENSQHTP00000005776.1 | GLYCINE DEHYDROGENASE, DECARBOXYLATING |
| ENSQHTP00000005777.1 | RIBONUCLEASE P SUBUNIT P30 |
| ENSQHTP00000005778.1 | SAND PROTEIN-RELATED |
| ENSQHTP00000005779.1 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 7 |
| ENSQHTP00000005780.1 | |
| ENSQHTP00000005781.1 | CHOLINE/ETHANOALAMINE KINASE |
| ENSQHTP00000005782.1 | |
| ENSQHTP00000005783.1 | GLUTATHIONE PEROXIDASE |
| ENSQHTP00000005784.1 | |
| ENSQHTP00000005785.1 | GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE |
| ENSQHTP00000005786.1 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| ENSQHTP00000005787.1 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 7 |
| ENSQHTP00000005788.1 | SAND PROTEIN-RELATED |
| ENSQHTP00000005789.1 | |
| ENSQHTP00000005790.1 | GLYCINE DEHYDROGENASE, DECARBOXYLATING |
| ENSQHTP00000005791.1 | RAB11-RELATED |
| ENSQHTP00000005792.1 | GLUTATHIONE PEROXIDASE |
| ENSQHTP00000005793.1 | PROTEIN SHORTAGE IN CHIASMATA 1 ORTHOLOG |
| ENSQHTP00000005794.1 | GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE |
| ENSQHTP00000005795.1 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 7 |
| ENSQHTP00000005796.1 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
| ENSQHTP00000005797.1 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE |
| ENSQHTP00000005798.1 | GLUTATHIONE PEROXIDASE |
| ENSQHTP00000005799.1 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| ENSQHTP00000005800.1 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| ENSQHTP00000005801.1 | UNCHARACTERIZED |
