About Ridgeia piscesae

Ridgeia piscesae is a tube worm found in a variety of environments on the Juan de Fuca Ridge. Found in clusters up to several square meters in area, these Polychaete’s lack a digestive tract, instead taking up organic carbon from symbiotic, chemoautotrophic bacteria found in their specially-evolved trophosomes. These bacteria oxidize sulfur in order to create organic material. Initially thought to be several species of the Ridgeia genus on the Juan de Fuca Ridge, genetic comparison showed that only one species existed, with various morphologies. The two extreme morphologies are the so-called long-skinny and fat-short forms.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Ridgeia (Genus); Ridgeia piscesae (Species)

Original Name

Ridgeia piscesae Jones, 1985

Key Reference Paper

1. Jones M L. On the Vestimentifera, new phylum: six new species, and other taxa, from hydrothermal vents and elsewhere[J]. Bull Biol Soc Wash, 1985, 6: 117. (Jones et al., 1985)
2. Southward E C, Tunnicliffe V, Black M. Revision of the species of Ridgeia from northeast Pacific hydrothermal vents, with a redescription of Ridgeia piscesae Jones (Pogonophora: Obturata= Vestimentifera)[J]. Canadian Journal of zoology, 1995, 73(2): 282-295. (Southward et al., 1995)

Distribution

Shepherd's Vent, Axial Seamount, Juande Fuca Ridge. Hydrothermal vents of Juan de Fuca Ridgeand northern Gorda Ridge


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Ridgeia piscesaeAnnelidatube wormsHydrothermal vent1,780-2,227the Juan de Fuca Ridge (47°57.00′ N, 129°5.82′ W)27915

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
R07B-5658.2MbContig2022JAODUO01Universite de MontrealPRJNA78643894.00 365.441-31,703

References
TitleJournalPubmed ID
Third-Generation Sequencing Reveals the Adaptive Role of the Epigenome in Three Deep-Sea PolychaetesMolecular Biology and Evolution37494294

Gene Information

<< First 1139 1140 1141 1142 1143 1144 1145 1146 1147 1148 Forward> Last>>        1581 pages in total

Gene IDDescription
KAK2171415.1-
KAK2171416.1COILIN
KAK2171417.1-
KAK2171418.1EPITHELIAL MEMBRANE PROTEIN-RELATED
KAK2171419.1ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6
KAK2171420.1DICER-RELATED
KAK2171421.1AP-5 COMPLEX SUBUNIT MU-1
KAK2171404.1DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
KAK2171405.1DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
KAK2171406.1RP42 RELATED
KAK2171407.1CARBONIC ANHYDRASE
KAK2171408.1CARBONIC ANHYDRASE
KAK2171409.1PEPTIDASE
KAK2171410.1RAGULATOR COMPLEX PROTEIN LAMTOR4
KAK2171411.1-
KAK2171412.1UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN
KAK2171386.1-
KAK2171387.1-
KAK2171388.1EXPRESSED PROTEIN
KAK2171389.1-
TOP