About Pseudoliparis swirei

Pseudoliparis swirei is a species of snailfish in the family Liparidae, discovered in the hadal zone of the Mariana Trench at depths exceeding 7,000 meters. This species is adapted to extreme deep-sea environments, thriving under immense pressure and near-freezing temperatures. Pseudoliparis swirei is characterized by its gelatinous body and reduced skeletal structure, which help it withstand the crushing pressures of the deep ocean. Its discovery provides valuable insights into the adaptations of vertebrates to one of the most extreme habitats on Earth.

Classification

Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Osteichthyes (Parvphylum); Actinopterygii (Gigaclass); Actinopteri (Superclass); Teleostei (Class); Perciformes (Order); Cottoidei (Suborder); Liparidae (Family); Pseudoliparis (Genus); Pseudoliparis swirei (Species)

Original Name

Pseudoliparis swirei Gerringer & Linley, 2017

Key Reference Paper

1. Gerringer M E, Linley T D, Jamieson A J, et al. Pseudoliparis swirei sp. nov.: a newly-discovered hadal snailfish (Scorpaeniformes: Liparidae) from the Mariana Trench[J]. Zootaxa, 2017, 4358(1): 161–177-161–177. (Gerringer et al., 2017)

Description

Holotype is immature. Ripe females had eggs up to 9.4 mm diameter, among the largest teleost eggs recorded, 0.4 mm smaller than the largest record. The eggs were unsorted within gonad, with the largest eggs free and interspersed within a matrix of smaller eggs. No developmental structures were visible within even the largest eggs. Two distinct size classes of eggs present with up to 23 large eggs (>5 mm) and up to 851 small eggs of less than half the diameter of the larger size class. There were rarely intermediate stages (Figure 7). Individuals with only small eggs had maximum egg sizes ranging from 0.7 to 1.4 mm. Genital papilla visible in freshly collected males, oriented anteriorly

Etymology

The Mariana Trench famously houses the ocean’s deepest point, at Challenger Deep, named for the HMS Challenger expedition which discovered the trench in 1875. Their deepest sounding of 8,184 m, then the greatest known ocean depth, was christened Swire Deep after Herbert Swire, the ship’s First Navigating Sublieutenant (Corfield 2003). We name this fish in his honor, in acknowledgment and gratitude of the crew members that have supported oceanographic research throughout history

Distribution

Known only from the Mariana Trench at capture depths from 6,898–7,966 m, individuals likely this species were recognized in video at depths 6,198–8,098 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordataMariana hadal snailfish (MHS)Deep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-684Mbscaffold2019--PRJNA47284691.70 25,738/4,21944-25,262

References
TitleJournalPubmed ID
Morphology and genome of a snailfish from the Mariana Trench provide insights into deep-sea adaptationNature Ecology & Evolution30988486

Gene Information

<< First 1050 1051 1052 1053 1054 1055 1056 1057 1058 1059 Forward> Last>>        1069 pages in total

Gene IDDescription
Tanaka21101HOMEOBOX PROTEIN ENGRAILED
Tanaka21102RNA-BINDING PROTEIN 33
Tanaka21103HEDGEHOG
Tanaka21104RING FINGER PROTEIN 32
Tanaka21105LIPOCALIN-1 INTERACTING MEMBRANE RECEPTOR LIMR
Tanaka21106CELL CYCLE CONTROL PROTEIN CWF22-RELATED
Tanaka21107MOTOR NEURON AND PANCREAS HOMEOBOX PROTEIN
Tanaka21108UBIQUITIN-PROTEIN LIGASE E3C
Tanaka21109DNAJ HOMOLOG SUBFAMILY B MEMBER 2
Tanaka21110IA-2 PROTEIN TYROSINE PHOSPHATASE, ISOFORM C
Tanaka21111CONDENSIN-2 COMPLEX SUBUNIT G2
Tanaka21112EXTENDED SYNAPTOTAGMIN-LIKE PROTEIN 2, ISOFORM C
Tanaka21113WD REPEAT DOMAIN 60
Tanaka21114SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3
Tanaka21115APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Tanaka21116TUMOR ENDOTHELIAL MARKER 7 RELATED
Tanaka21117GTPASE, IMAP FAMILY MEMBER-RELATED
Tanaka21118CHARGED MULTIVESICULAR BODY PROTEIN
Tanaka21119ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED
Tanaka21120REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1
TOP