About Ridgeia piscesae

Ridgeia piscesae is a tube worm found in a variety of environments on the Juan de Fuca Ridge. Found in clusters up to several square meters in area, these Polychaete’s lack a digestive tract, instead taking up organic carbon from symbiotic, chemoautotrophic bacteria found in their specially-evolved trophosomes. These bacteria oxidize sulfur in order to create organic material. Initially thought to be several species of the Ridgeia genus on the Juan de Fuca Ridge, genetic comparison showed that only one species existed, with various morphologies. The two extreme morphologies are the so-called long-skinny and fat-short forms.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Ridgeia (Genus); Ridgeia piscesae (Species)

Original Name

Ridgeia piscesae Jones, 1985

Key Reference Paper

1. Jones M L. On the Vestimentifera, new phylum: six new species, and other taxa, from hydrothermal vents and elsewhere[J]. Bull Biol Soc Wash, 1985, 6: 117. (Jones et al., 1985)
2. Southward E C, Tunnicliffe V, Black M. Revision of the species of Ridgeia from northeast Pacific hydrothermal vents, with a redescription of Ridgeia piscesae Jones (Pogonophora: Obturata= Vestimentifera)[J]. Canadian Journal of zoology, 1995, 73(2): 282-295. (Southward et al., 1995)

Distribution

Shepherd's Vent, Axial Seamount, Juande Fuca Ridge. Hydrothermal vents of Juan de Fuca Ridgeand northern Gorda Ridge


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Ridgeia piscesaeAnnelidatube wormsHydrothermal vent1,780-2,227the Juan de Fuca Ridge (47°57.00′ N, 129°5.82′ W)27915

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
R07B-5658.2MbContig2022JAODUO01Universite de MontrealPRJNA78643894.00 365.441-31,703

References
TitleJournalPubmed ID
Third-Generation Sequencing Reveals the Adaptive Role of the Epigenome in Three Deep-Sea PolychaetesMolecular Biology and Evolution37494294

Gene Information

<< First 1017 1018 1019 1020 1021 1022 1023 1024 1025 1026 Forward> Last>>        1581 pages in total

Gene IDDescription
KAK2173870.1-
KAK2173839.1HISTONE H4
KAK2173840.1HISTONE H2B
KAK2173842.1HISTONE H4
KAK2173841.1HISTONE H2A
KAK2173843.1HISTONE H2B
KAK2173844.1HISTONE H2A
KAK2173845.1LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
KAK2173846.1DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
KAK2173847.1DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
KAK2173848.1GTP-BINDING PROTEIN ALPHA SUBUNIT
KAK2173849.1GTP-BINDING PROTEIN ALPHA SUBUNIT
KAK2173850.1PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED
KAK2173851.1ADENYLOSUCCINATE LYASE
KAK2173852.1ANKYRIN REPEAT PROTEIN
KAK2173853.1IMPORTIN BETA
KAK2173854.1ADENYLOSUCCINATE LYASE
KAK2173855.1-
KAK2173856.1NUCLEAR PROTEIN LOCALIZATION 4
KAK2173857.1-
TOP