Gene detail

Detailed information of scaffold8250_cov89_0.23 in Dracogyra subfusca Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
scaffold8250_cov89_0.23	FERROUS IRON TRANSPORT PROTEIN B	scaffold8250_cov89	19588	21591	+

Gene Structure

More details in Jbrowse Sequence

CDS

scaffold8250_cov89_0.23

ATGCTTATCAATGTGATGACTGGTTCTGGCAGATTGAAAGTCGGTAACTTCCCTGGAGTTACAGTTGAGAAAACAGAGATATGTTTTGAGCATCACTGTCATCAATTTGAACTTGTAGATCTGCCAGGTACCTATTCGATCGAAGGCTTCTCCCAAGAGGAGAAAGTCGCTAGAGACTATCTGCTAAATGAAGAGTATGATGTGATTATAAATGTGATTGACTCTACTCACTTGCAGAGAAATCTACTTCTGACCCTTGAGCTTCTAAAACTTAGCAAAAAGATGGTGATAGCACTTAATATGACGGATGAGGCCAAAAAAGAGGGCATCCATATAGATGCAGAGCAGATAGAAGCTATAATTGGTGTTCCAGTAGTAATGGTATCTGCTAAAACTGGAGAAGGGATAGATAAGCTATTAGATACTGTACATGATGTAGCGGATAGTCCTATAAGGCAGAGATCAAAGATACTCTATAGCGATCCAGTCGAGGAAGAGATTGCCAAGCTGATAGAGTTCTTTGATGAGAGAGGGTTTAGGCTGGATGATTTGACATTCAGAGAGCTTGCTATCAGGTTGCTGTTTGGCGACAAAGCTATCTATGAGAGACTACATGATGAACCTATAATGATAGAGCTTCAGCCTATATTAGTGGAATCATTAGAGCACCTATATACACACCATCAGGCAAAAAATATAGATGAGATAAAATCAAATGAATATATAGCTATCGCTCGTGGTATAAGGATGGAGACAGTCAGATGTGATAGGGAGAAAAAGGGCAGAAATCTTACCAGGCAGATAGATGATATATTAATAAATAAATATTTTGGTATTCCTATTTTCCTATTTTTTATGTGGGCTCTGTTTCAGTTGACATTTGAGCTGGGTGCCGTGCCTATGGACTGGATAGATGCAGGATTTGGTATGCTGGGTGATGCCGTGGGATCCATGATTAGTCATGAAGGGCTACGAAGTCTCATTGTAGATGGTGCCATAGCTGGTGTTGGTGCAGTAGTGCTATTTCTGCCAAATATTATCATTCTCTATATAGGCATAGCACTACTAGAGACAACTGGATACATGAGTAGAGTAGCATTTTTGCTTGATGGATTTTTTCACAAATTTGGACTGCATGGCAAGAGCTTTATCCCGCTTGTTACGGGATTTGGCTGTACCGTGCCTGCATATATGGCTACACGAACACTCAAGAGTGAAAAAGATAGATTAATTACGCTATTTATACTGGGGTTTATGAGCTGTGGTGCAAAGTTGCCTATCTATGTACTTTTTGCAGGAGCTTTTTTCGGACCAGAGCAGGCTGGTAATGTTATATTTGCTATATATATTGGCGGTGCATTGCTAGGTCTTGTCATGGCGAAAGCCCTTAGAGTGTTTGTGTTCAAGGGAGAGGATGAGCCGTTTGTGATGGAGATGCCAAAGTACAGATTGCCAAGCCTTAAGTTGATATGGCATACAGTGTACAATCAGGCTAAAAGCTACCTCAAAAAAGCTGGTACCTTTATACTGGCTGCATCTATGCTGATATGGTTTGCCTCAACATATCCAAAGGTGGACATCCCTGTGGGACTATATGAAAATATGGCAAAGCTTTATGAGCTGGAGCATAGCTATCTAGGTCAGCTTGGCAAAGCAAGTGAACCATTCTTTGCACCTTTAGGCTTTGATTGGAAGATGGCAGTTGCACTTGAGACTGGATTGGCAGCTAAAGAGGTTGTGGTCTCAACACTAGGTGTTCTTTATGCGATTGGAGATGAGGCCGATGAGAGCAGCAAATCTCTGATAGAACAACTCAAAGCAAATGTTCCTTTTGCTTCGGCTATTGCATTTATAGTGTTTGTCATGATTTATCTACCTTGTCTGGCAGCCAGCATGGTGTTTGTTAGAGAAGCTGGTGGCTGGAGATATCTGGCTTATCTGTTTGTGTTCACTACAGCTACCGCCTGGATTCTTTCATTTGTAACCTACAGGATACTTCTCTAG

Transcript

scaffold8250_cov89_0.23

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02421	FeoB_N	Ferrous iron transport protein B	Domain	Interproscan
PF07664	FeoB_C	Ferrous iron transport protein B C terminus	Family	Interproscan
PF07670	Gate	Nucleoside recognition	Domain	Interproscan
PF17910	FeoB_Cyto	FeoB cytosolic helical domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003373	Family	Ferrous iron transport protein B	Interproscan
IPR011640	Domain	Ferrous iron transport protein B, C-terminal	Interproscan
IPR011642	Domain	Nucleoside transporter/FeoB GTPase, Gate domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR030389	Domain	FeoB-type guanine nucleotide-binding (G) domain	Interproscan
IPR041069	Domain	FeoB, cytosolic helical domain	Interproscan
IPR050860	Family	Fe(2+) Transporter FeoB GTPase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43185	FERROUS IRON TRANSPORT PROTEIN B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006826	Biological Process	iron ion transport	Interproscan
GO:0015093	Molecular Function	ferrous iron transmembrane transporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-