| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| scaffold7470_cov111_0.0 | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 | scaffold7470_cov111 | 4619 | 5684 | + |
| CDS | |||||
| scaffold7470_cov111_0.0 | |||||
| Transcript |
| scaffold7470_cov111_0.0 |
| Protein |
| scaffold7470_cov111_0.0 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03657 | UPF0113 | UPF0113 PUA domain | Domain | Interproscan |
| PF17833 | UPF0113_N | UPF0113 Pre-PUA domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005155 | Domain | UPF0113, PUA domain | Interproscan |
| IPR015947 | Homologous_superfamily | PUA-like superfamily | Interproscan |
| IPR036974 | Homologous_superfamily | PUA domain superfamily | Interproscan |
| IPR040598 | Domain | 60S ribosome subunit biogenesis protein NIP7, pre-PUA domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23415 | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| GO:0030687 | Cellular Component | preribosome, large subunit precursor | Interproscan |
| GO:0042273 | Biological Process | ribosomal large subunit biogenesis | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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