| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| scaffold392626_cov72_0.20 | DNA TOPOISOMERASE, TYPE IA, CORE | scaffold392626_cov72 | 2987 | 5185 | - |
| CDS | |||||
| scaffold392626_cov72_0.20 | |||||
| Transcript |
| scaffold392626_cov72_0.20 |
| Protein |
| scaffold392626_cov72_0.20 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01131 | Topoisom_bac | DNA topoisomerase | Family | Interproscan |
| PF01396 | zf-C4_Topoisom | Topoisomerase DNA binding C4 zinc finger | Domain | Interproscan |
| PF01751 | Toprim | Toprim domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000380 | Family | DNA topoisomerase, type IA | Interproscan |
| IPR003601 | Domain | DNA topoisomerase, type IA, domain 2 | Interproscan |
| IPR003602 | Domain | DNA topoisomerase, type IA, DNA-binding domain | Interproscan |
| IPR005733 | Family | DNA topoisomerase I, bacterial-type | Interproscan |
| IPR006171 | Domain | TOPRIM domain | Interproscan |
| IPR013497 | Domain | DNA topoisomerase, type IA, central | Interproscan |
| IPR013498 | Domain | DNA topoisomerase, type IA, zn finger | Interproscan |
| IPR013824 | Homologous_superfamily | DNA topoisomerase, type IA, central region, subdomain 1 | Interproscan |
| IPR013825 | Homologous_superfamily | DNA topoisomerase, type IA, central region, subdomain 2 | Interproscan |
| IPR013826 | Homologous_superfamily | DNA topoisomerase, type IA, central region, subdomain 3 | Interproscan |
| IPR023405 | Homologous_superfamily | DNA topoisomerase, type IA, core domain | Interproscan |
| IPR023406 | Active_site | DNA topoisomerase, type IA, active site | Interproscan |
| IPR028612 | Family | DNA topoisomerase I, type IA | Interproscan |
| IPR034149 | Domain | DNA topoisomerase 1, TOPRIM domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR42785 | DNA TOPOISOMERASE, TYPE IA, CORE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003916 | Molecular Function | DNA topoisomerase activity | Interproscan |
| GO:0003917 | Molecular Function | DNA topoisomerase type I (single strand cut, ATP-independent) activity | Interproscan |
| GO:0005694 | Cellular Component | chromosome | Interproscan |
| GO:0006265 | Biological Process | DNA topological change | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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