Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
scaffold390934_cov122_0.1 | 30S/40S RIBOSOMAL PROTEIN S4 | scaffold390934_cov122 | 3541 | 11499 | - |
CDS | |||||
scaffold390934_cov122_0.1 | |||||
Transcript |
scaffold390934_cov122_0.1 |
Protein |
scaffold390934_cov122_0.1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00467 | KOW | KOW motif | Family | Interproscan |
PF00900 | Ribosomal_S4e | Ribosomal family S4e | Family | Interproscan |
PF16121 | 40S_S4_C | 40S ribosomal protein S4 C-terminus | Family | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000876 | Family | Small ribosomal subunit protein eS4 | Interproscan |
IPR005824 | Domain | KOW | Interproscan |
IPR013845 | Domain | Small ribosomal subunit protein eS4, central region | Interproscan |
IPR014722 | Homologous_superfamily | Large ribosomal subunit protein uL2, domain 2 | Interproscan |
IPR032277 | Domain | Small ribosomal subunit protein eS4, C-terminal domain | Interproscan |
IPR036986 | Homologous_superfamily | RNA-binding S4 domain superfamily | Interproscan |
IPR038237 | Homologous_superfamily | Small ribosomal subunit protein eS4, central domain superfamily | Interproscan |
IPR041982 | Domain | Small ribosomal subunit protein eS4, KOW domain | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR11581 | 30S/40S RIBOSOMAL PROTEIN S4 | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:0003735 | Molecular Function | structural constituent of ribosome | Interproscan |
GO:0005840 | Cellular Component | ribosome | Interproscan |
GO:0006412 | Biological Process | translation | Interproscan |
GO:0022627 | Cellular Component | cytosolic small ribosomal subunit | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |