| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| scaffold33191_cov86_0.52 | DNA GYRASE/TOPOISOMERASE SUBUNIT B | scaffold33191_cov86 | 42849 | 45095 | + |
| CDS | |||||
| scaffold33191_cov86_0.52 | |||||
| Transcript |
| scaffold33191_cov86_0.52 |
| Protein |
| scaffold33191_cov86_0.52 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00204 | DNA_gyraseB | DNA gyrase B | Domain | Interproscan |
| PF00986 | DNA_gyraseB_C | DNA gyrase B subunit, carboxyl terminus | Family | Interproscan |
| PF01751 | Toprim | Toprim domain | Family | Interproscan |
| PF02518 | HATPase_c | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Domain | Interproscan |
| PF21249 | GyrB_hook | GyrB, hook | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000565 | Family | DNA topoisomerase, type IIA, subunit B | Interproscan |
| IPR001241 | Family | DNA topoisomerase, type IIA | Interproscan |
| IPR002288 | Domain | DNA gyrase B subunit, C-terminal | Interproscan |
| IPR003594 | Domain | Histidine kinase/HSP90-like ATPase | Interproscan |
| IPR006171 | Domain | TOPRIM domain | Interproscan |
| IPR011557 | Family | DNA gyrase, subunit B | Interproscan |
| IPR013506 | Domain | DNA topoisomerase, type IIA, subunit B, domain 2 | Interproscan |
| IPR013759 | Homologous_superfamily | DNA topoisomerase, type IIA, subunit B, C-terminal | Interproscan |
| IPR013760 | Homologous_superfamily | DNA topoisomerase, type IIA-like domain superfamily | Interproscan |
| IPR014721 | Homologous_superfamily | Small ribosomal subunit protein uS5 domain 2-type fold, subgroup | Interproscan |
| IPR018522 | Conserved_site | DNA topoisomerase, type IIA, conserved site | Interproscan |
| IPR020568 | Homologous_superfamily | Ribosomal protein uS5 domain 2-type superfamily | Interproscan |
| IPR034160 | Domain | DNA gyrase subunit B, TOPRIM domain | Interproscan |
| IPR036890 | Homologous_superfamily | Histidine kinase/HSP90-like ATPase superfamily | Interproscan |
| IPR049353 | Domain | DNA gyrase subunit B, hook | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45866 | DNA GYRASE/TOPOISOMERASE SUBUNIT B | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003918 | Molecular Function | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005694 | Cellular Component | chromosome | Interproscan |
| GO:0006265 | Biological Process | DNA topological change | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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