Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
scaffold28300_cov162_0.0 | DNA2/NAM7 HELICASE FAMILY | scaffold28300_cov162 | 20431 | 33364 | - |
CDS | |||||
scaffold28300_cov162_0.0 | |||||
Transcript |
scaffold28300_cov162_0.0 |
Protein |
scaffold28300_cov162_0.0 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF04851 | ResIII | Type III restriction enzyme, res subunit | Family | Interproscan |
PF13086 | AAA_11 | AAA domain | Domain | Interproscan |
PF13087 | AAA_12 | AAA domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR006935 | Domain | Helicase/UvrB, N-terminal | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
IPR041677 | Domain | DNA2/NAM7 helicase, helicase domain | Interproscan |
IPR041679 | Domain | DNA2/NAM7 helicase-like, C-terminal | Interproscan |
IPR045055 | Family | DNA2/NAM7-like helicase | Interproscan |
IPR047187 | Domain | Upf1-like, C-terminal helicase domain | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR10887 | DNA2/NAM7 HELICASE FAMILY | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0000184 | Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Interproscan |
GO:0003677 | Molecular Function | DNA binding | Interproscan |
GO:0003724 | Molecular Function | RNA helicase activity | Interproscan |
GO:0004386 | Molecular Function | helicase activity | Interproscan |
GO:0005524 | Molecular Function | ATP binding | Interproscan |
GO:0005737 | Cellular Component | cytoplasm | Interproscan |
GO:0016787 | Molecular Function | hydrolase activity | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |