Detailed information of scaffold237024_cov145_0.18 in Dracogyra subfusca Gene info
Gene IDAnnotationScaffoldStartEndStrand
scaffold237024_cov145_0.18SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNELscaffold237024_cov14533364118+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00924MS_channel_2ndMechanosensitive ion channel, beta-domainDomainInterproscan
PF21082MS_channel_3rdMechanosensitive ion channel MscS, C-terminalDomainInterproscan
PF21088MS_channel_1stMechanosensitive ion channel, transmembrane helices 2/3DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006685DomainMechanosensitive ion channel MscSInterproscan
IPR010920Homologous_superfamilyLSM domain superfamilyInterproscan
IPR011014Homologous_superfamilyMechanosensitive ion channel MscS, transmembrane-2Interproscan
IPR011066Homologous_superfamilyMechanosensitive ion channel MscS, C-terminal domain superfamilyInterproscan
IPR023408Homologous_superfamilyMechanosensitive ion channel MscS, beta-domain superfamilyInterproscan
IPR045275FamilyMechanosensitive ion channel MscS, archaea/bacteria typeInterproscan
IPR049142DomainMechanosensitive ion channel, transmembrane helices 2/3Interproscan
IPR049278DomainMechanosensitive ion channel MscS, C-terminal domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR30221SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNELInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0008381Molecular Functionmechanosensitive monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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