| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| scaffold200582_cov122_0.0 | PHAGE INTEGRASE-RELATED | scaffold200582_cov122 | 180 | 1109 | - |
| CDS | |||||
| scaffold200582_cov122_0.0 | |||||
| Transcript |
| scaffold200582_cov122_0.0 |
| Protein |
| scaffold200582_cov122_0.0 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00589 | Phage_integrase | Phage integrase family | Family | Interproscan |
| PF13495 | Phage_int_SAM_4 | Phage integrase, N-terminal SAM-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002104 | Domain | Integrase, catalytic domain | Interproscan |
| IPR004107 | Domain | Integrase, SAM-like, N-terminal | Interproscan |
| IPR010998 | Homologous_superfamily | Integrase/recombinase, N-terminal | Interproscan |
| IPR011010 | Homologous_superfamily | DNA breaking-rejoining enzyme, catalytic core | Interproscan |
| IPR011946 | Family | Integrase, integron-type | Interproscan |
| IPR013762 | Homologous_superfamily | Integrase-like, catalytic domain superfamily | Interproscan |
| IPR044068 | Domain | Core-binding (CB) domain | Interproscan |
| IPR050090 | Family | Bacterial tyrosine recombinase XerC/XerD complex | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR30349 | PHAGE INTEGRASE-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006310 | Biological Process | DNA recombination | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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