| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| scaffold192812_cov167_0.0 | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD | scaffold192812_cov167 | 3754 | 4404 | - |
| CDS | |||||
| scaffold192812_cov167_0.0 | |||||
| Transcript |
| scaffold192812_cov167_0.0 |
| Protein |
| scaffold192812_cov167_0.0 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR051183 | Family | U1 snRNP 70 kDa and U11/U12 snRNP 35 kDa | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13952 | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003729 | Molecular Function | mRNA binding | Interproscan |
| GO:0005689 | Cellular Component | U12-type spliceosomal complex | Interproscan |
| GO:0017069 | Molecular Function | snRNA binding | Interproscan |
| GO:0071011 | Cellular Component | precatalytic spliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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