Detailed information of scaffold17567_cov97_0.54 in Dracogyra subfusca Gene info
Gene IDAnnotationScaffoldStartEndStrand
scaffold17567_cov97_0.54RIBOSOMAL PROTEIN S12 METHYLTHIOTRANSFERASE RIMOscaffold17567_cov973782538862-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04055Radical_SAMRadical SAM superfamilyDomainInterproscan
PF18693TRAM_2TRAM domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002792DomainTRAM domainInterproscan
IPR005840FamilyRibosomal protein uS12 methylthiotransferase RimOInterproscan
IPR006638DomainElp3/MiaA/NifB-like, radical SAM core domainInterproscan
IPR007197DomainRadical SAMInterproscan
IPR020612Conserved_siteMethylthiotransferase, conserved siteInterproscan
IPR023404Homologous_superfamilyRadical SAM, alpha/beta horseshoeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43837RIBOSOMAL PROTEIN S12 METHYLTHIOTRANSFERASE RIMOInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016740Molecular Functiontransferase activityInterproscan
GO:0018339Biological Processpeptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acidInterproscan
GO:0035599Molecular Functionaspartic acid methylthiotransferase activityInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0051539Molecular Function4 iron, 4 sulfur cluster bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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