Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
scaffold171532_cov164_0.1 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 | scaffold171532_cov164 | 2130 | 8045 | - |
CDS | |||||
scaffold171532_cov164_0.1 | |||||
Transcript |
scaffold171532_cov164_0.1 |
Protein |
scaffold171532_cov164_0.1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF01191 | RNA_pol_Rpb5_C | RNA polymerase Rpb5, C-terminal domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000783 | Domain | RNA polymerase, subunit H/Rpb5 C-terminal | Interproscan |
IPR014381 | Family | DNA-directed RNA polymerase subunit Rpo5/Rpb5 | Interproscan |
IPR020608 | Conserved_site | RNA polymerase, subunit H/Rpb5, conserved site | Interproscan |
IPR035913 | Homologous_superfamily | RPB5-like RNA polymerase subunit superfamily | Interproscan |
IPR036710 | Homologous_superfamily | RNA polymerase Rpb5, N-terminal domain superfamily | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR10535 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0001054 | Molecular Function | RNA polymerase I activity | Interproscan |
GO:0001055 | Molecular Function | RNA polymerase II activity | Interproscan |
GO:0001056 | Molecular Function | RNA polymerase III activity | Interproscan |
GO:0003677 | Molecular Function | DNA binding | Interproscan |
GO:0003899 | Molecular Function | DNA-directed 5'-3' RNA polymerase activity | Interproscan |
GO:0005665 | Cellular Component | RNA polymerase II, core complex | Interproscan |
GO:0005666 | Cellular Component | RNA polymerase III complex | Interproscan |
GO:0005736 | Cellular Component | RNA polymerase I complex | Interproscan |
GO:0006351 | Biological Process | DNA-templated transcription | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |