Gene detail

Detailed information of scaffold15656_cov147_0.1 in Dracogyra subfusca Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
scaffold15656_cov147_0.1	N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE	scaffold15656_cov147	837	8056	+

Gene Structure

More details in Jbrowse Sequence

CDS

scaffold15656_cov147_0.1

TCGAGATTTGGTGGTCAGTTAATTGCATACATACAGTGATATCAAATGCTGAGGAACATCACAATTAACAGTTTTCTTCTCATTAGAGGTTGCAGGAAAACATTTTGGCTGAGACATTTCCGTTTTTCTGTAAGCTGCATTATGTCGTGTGAAGAAACTGACAGCATTGTTGTCCATGAGGGCAAAGCCAAGGTTCACACGCCAAAGTCAGTTTTCTACAACCCAGTGCAAGAATTCAACAGAGATCTGACAGTAGCAGTTATTTCACAGTACGCTCAGGAATATTTTGAAAATAAAAAATCAAAACCAAATAGACGGGCAAAGAAAACAGACGAGGATAACACTTCACATAGTGACATTGGTAACAGAGACGAAATTAAGACAAATTTGGAAAACATTGACATTAGTGGGACTCCCAAGAATGGGAATGCTGATCTGAAATGTGGCGAATCGTTTGAAAATGGAATCCGTATCTTTGAAGGTTTAGCTGCATCAGGACTCCGATCGGTGAGGTTCGGTTTGGAAATTCCTGGAGTGAAGGAAGTAATTGCCAATGACTTTGATGAAAATGCTGTGAGTTTTATAGACAAAAACATTGAAAAGAATAGCCTGCAGGGTTTGGTTAAATCGAGCTGCGGAGATGCTGCCATGGTGATGTACCAGAACAAGAGTGTCGCAGATAGATTTGATGTCATCGACTTGGACCCATACGGAAGTCCATCAGTATTTCTAGATGCTGCTGTCCAAGCTGTTAAAGATGGTGGGCTGCTCTGCGTCACGTGTACTGATCTTGCTGTTATGTGTGGAAACGCTGGTGAAACGTGTTACTCGAAATACGGAAGTATGTCTTTGAAGGGAAAGTTCTGCCATGAGATGGCGTTGAGGATTATTTTACAGTCAATCGAGTCGCATGCCAACCGGTATTCCAGATACATCGTTCCGCTGATCTCCATGAGTGCTGATTTCTACCTGCGCGTGTTTGTGAGGGTCTTCACGGGACAGATCAAAGTGAAGGAGGCCGTCAGTAAACTAGCCATGGTGTACCTCTGTACCGGGTGTGGAGCATACAGTCTACAAAGACTGGGTGTTAAAGTGCCCACCAAGGGAGATAATGTCAAGTTCAATCCGTGTACTGGTCCACCAGTCGGTCCGAGGTGCGATCACTGTGGATTTAAACACCACTTCGGAGGCCCGATTTGGGTGGACCCAATCCACGATGTAGACTTTATTCAAAGTGTTCTAAGAAACATTCAAGAGGATCCAAATCAGTTGCGAACATCAGAGAGGATTGTGGGAATGCTGAGTGTGATGAGTGAGGAACTTCCCGATGTGCCACTGTATTACATTCTCGATGAATTGTGTAACACTCTACACTGTACTCCACTTAGCTTGCAGCTGTTTAGATCGGCCATTCTGAATGCTGGATATAAAGTCTCTATGTCCCATGCTGCAAAGAACTCTCACAAGACCGATGCACCAATGGCGCTAATTTGGGACATCATGAGAGAATGGATTAAAGATAACCCGGTGAAATCGCATCGACTCAAAGAAGGAACCCCCGTGAAACACATCCTCGAAAAAGAGCAGAAGCACACAGTTTCTTTTGACTTGCATCCCGACGCAAACCCTAAATCACGACAACAGGGCTTGTTGCGCTGGCAGAAAAACCCTGAGAGAGAGTGGGGCCCTAAACCAAGAGCGAAGAAGTCCGGAGGGAGCAGCCAGACGATGGTGGAATGTAGGGAAGAGAAGCAAGGCAAACGGAAAGCAAAACAGCAGGTGCCGCCTGACTACCGAAAGCAGTTTCCATGTAAGAAGTTCAAACAAGGTCACTGTGAACATGGTTCCGACTGTTGTTACAGTCACGAAATGGTCAACACAGAAGATACGAAATCAGCGGGCACACTGGAAGAAAATCAGTCCTAACAGTTTCACAATGACCACTGGCAAAACTGACTATTTACAGCCAAAAATACATAGCCTGTTTTTGTTTGAATCTTACATGACTACACATAATTAAATAATATAATAATAAATTTTATTTACAATGGATTTATGAAAAACAGGGATTATAAATTTGGCTGAATATTTTTTATTGGAGATATCCATAAAGAGAAGAAATATGTCAAATAGACATTTTAAACAAGCACTAAATTCCATGTTATTTATAGGTAATATGCCAGATTCACTCTGGATTATAAATTAAAATGTTGAAATTAAATTACCCAGTTGAATTTTGTTGGCATATTCTTCATGTGTTGAATGAATGTTTTGGACAGAGAACGTGCAACATTTTGTTGTGAACAAAACCAATATGAAGTACTTGATGTGAACATTGGAAA

Transcript

scaffold15656_cov147_0.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02005	TRM	N2,N2-dimethylguanosine tRNA methyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000571	Domain	Zinc finger, CCCH-type	Interproscan
IPR002905	Family	tRNA methyltransferase, Trm1	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR042296	Homologous_superfamily	tRNA methyltransferase, Trm1, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10631	N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0002940	Biological Process	tRNA N2-guanine methylation	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004809	Molecular Function	obsolete tRNA (guanine-N2-)-methyltransferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0008033	Biological Process	tRNA processing	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0160102	Molecular Function	tRNA (guanine(10)-N2)-methyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-