| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| scaffold1187250_cov408_0.0 | DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA | scaffold1187250_cov408 | 29 | 622 | - |
| CDS | |||||
| null |
| Transcript |
| null |
| Protein |
| null |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01000 | RNA_pol_A_bac | RNA polymerase Rpb3/RpoA insert domain | Domain | Interproscan |
| PF01193 | RNA_pol_L | RNA polymerase Rpb3/Rpb11 dimerisation domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011262 | Domain | DNA-directed RNA polymerase, insert domain | Interproscan |
| IPR011263 | Domain | DNA-directed RNA polymerase, RpoA/D/Rpb3-type | Interproscan |
| IPR036603 | Homologous_superfamily | RNA polymerase, RBP11-like subunit | Interproscan |
| IPR036643 | Homologous_superfamily | DNA-directed RNA polymerase, insert domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR32108 | DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003899 | Molecular Function | DNA-directed 5'-3' RNA polymerase activity | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006351 | Biological Process | DNA-templated transcription | Interproscan |
| GO:0046983 | Molecular Function | protein dimerization activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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