| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| scaffold109260_cov87_0.7 | RECA | scaffold109260_cov87 | 13443 | 14333 | + |
| CDS | |||||
| scaffold109260_cov87_0.7 | |||||
| Transcript |
| scaffold109260_cov87_0.7 |
| Protein |
| scaffold109260_cov87_0.7 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00154 | RecA | recA bacterial DNA recombination protein | Family | Interproscan |
| PF21096 | RecA_C | RecA C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003593 | Domain | AAA+ ATPase domain | Interproscan |
| IPR013765 | Family | DNA recombination and repair protein RecA | Interproscan |
| IPR020587 | Domain | DNA recombination and repair protein RecA, monomer-monomer interface | Interproscan |
| IPR020588 | Domain | DNA recombination and repair protein RecA-like, ATP-binding domain | Interproscan |
| IPR023400 | Homologous_superfamily | DNA recombination and repair protein RecA, C-terminal, superfamily | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR049261 | Domain | RecA-like, C-terminal | Interproscan |
| IPR049428 | Domain | RecA-like, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45900 | RECA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003697 | Molecular Function | single-stranded DNA binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0006259 | Biological Process | DNA metabolic process | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0008094 | Molecular Function | ATP-dependent activity, acting on DNA | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0140664 | Molecular Function | ATP-dependent DNA damage sensor activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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