| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| scaffold1086065_cov455_0.43 | DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA' | scaffold1086065_cov455 | 7756 | 11886 | - |
| CDS | |||||
| null |
| Transcript |
| null |
| Protein |
| null |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04998 | RNA_pol_Rpb1_5 | RNA polymerase Rpb1, domain 5 | Domain | Interproscan |
| PF05000 | RNA_pol_Rpb1_4 | RNA polymerase Rpb1, domain 4 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007081 | Domain | RNA polymerase Rpb1, domain 5 | Interproscan |
| IPR007083 | Domain | RNA polymerase Rpb1, domain 4 | Interproscan |
| IPR012756 | Family | DNA-directed RNA polymerase, subunit beta'' | Interproscan |
| IPR038120 | Homologous_superfamily | RNA polymerase Rpb1, funnel domain superfamily | Interproscan |
| IPR042102 | Homologous_superfamily | RNA polymerase Rpb1, domain 3 superfamily | Interproscan |
| IPR050254 | Family | DNA-directed RNA polymerase beta' chain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48355 | DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA' | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003899 | Molecular Function | DNA-directed 5'-3' RNA polymerase activity | Interproscan |
| GO:0006351 | Biological Process | DNA-templated transcription | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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