Detailed information of scaffold1085061_cov479_0.1 in Dracogyra subfusca Gene info
Gene IDAnnotationScaffoldStartEndStrand
scaffold1085061_cov479_0.1RNA POLYMERASE SIGMA FACTOR RPOscaffold1085061_cov4795201317-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04539Sigma70_r3Sigma-70 region 3FamilyInterproscan
PF04542Sigma70_r2Sigma-70 region 2 DomainInterproscan
PF04545Sigma70_r4Sigma-70, region 4DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000943DomainRNA polymerase sigma-70Interproscan
IPR007624DomainRNA polymerase sigma-70 region 3Interproscan
IPR007627DomainRNA polymerase sigma-70 region 2Interproscan
IPR007630DomainRNA polymerase sigma-70 region 4Interproscan
IPR013324Homologous_superfamilyRNA polymerase sigma factor, region 3/4-likeInterproscan
IPR013325Homologous_superfamilyRNA polymerase sigma factor, region 2Interproscan
IPR014284DomainRNA polymerase sigma-70 like domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR050239FamilySigma-70 factor family, RNA polymerase initiation factorsInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR30603RNA POLYMERASE SIGMA FACTOR RPOInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006352Biological ProcessDNA-templated transcription initiationInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP