Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
scaffold1084710_cov503_0.22 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED | scaffold1084710_cov503 | 6232 | 7653 | - |
CDS | |||||
scaffold1084710_cov503_0.22 | |||||
Transcript |
scaffold1084710_cov503_0.22 |
Protein |
scaffold1084710_cov503_0.22 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000629 | Conserved_site | ATP-dependent RNA helicase DEAD-box, conserved site | Interproscan |
IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
IPR014014 | Domain | RNA helicase, DEAD-box type, Q motif | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
IPR050079 | Family | DEAD box RNA helicase | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR47959 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0000027 | Biological Process | ribosomal large subunit assembly | Interproscan |
GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
GO:0003724 | Molecular Function | RNA helicase activity | Interproscan |
GO:0005524 | Molecular Function | ATP binding | Interproscan |
GO:0005829 | Cellular Component | cytosol | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |