| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| scaffold1071949_cov140_0.0 | SPLICING FACTOR SF3A-RELATED | scaffold1071949_cov140 | 7538 | 11956 | + |
| CDS | |||||
| scaffold1071949_cov140_0.0 | |||||
| Transcript |
| scaffold1071949_cov140_0.0 |
| Protein |
| scaffold1071949_cov140_0.0 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF11931 | SF3a60_Prp9_C | SF3a60/Prp9 C-terminal | Family | Interproscan |
| PF13297 | SDE2_2C | Replication stress response SDE2 C-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR024598 | Domain | Splicing factor SF3a60 /Prp9 subunit, C-terminal | Interproscan |
| IPR025086 | Domain | SDE2-like, C-terminal domain | Interproscan |
| IPR051421 | Family | RNA Processing and DNA Damage Response Regulator | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12786 | SPLICING FACTOR SF3A-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005681 | Cellular Component | spliceosomal complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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