| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| scaffold1062425_cov162_0.0 | L1 TRANSPOSABLE ELEMENT-RELATED | scaffold1062425_cov162 | 606 | 1749 | + |
| CDS | |||||
| null |
| Transcript |
| null |
| Protein |
| null |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02994 | Transposase_22 | L1 transposable element RBD-like domain | Domain | Interproscan |
| PF17490 | Tnp_22_dsRBD | L1 transposable element dsRBD-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004244 | Family | Transposase, L1 | Interproscan |
| IPR035300 | Domain | L1 transposable element, dsRBD-like domain | Interproscan |
| IPR042566 | Homologous_superfamily | L1 transposable element, C-terminal domain | Interproscan |
| IPR043636 | Domain | L1 transposable element, RRM domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11505 | L1 TRANSPOSABLE ELEMENT-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003727 | Molecular Function | single-stranded RNA binding | Interproscan |
| GO:0032197 | Biological Process | retrotransposition | Interproscan |
| GO:1990904 | Cellular Component | ribonucleoprotein complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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