| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| scaffold102026_cov77_0.56 | TRANSCRIPTION ELONGATION FACTOR GREA | scaffold102026_cov77 | 26774 | 27247 | - |
| CDS | |||||
| scaffold102026_cov77_0.56 | |||||
| Transcript |
| scaffold102026_cov77_0.56 |
| Protein |
| scaffold102026_cov77_0.56 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01272 | GreA_GreB | Transcription elongation factor, GreA/GreB, C-term | Domain | Interproscan |
| PF03449 | GreA_GreB_N | Transcription elongation factor, N-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001437 | Domain | Transcription elongation factor, GreA/GreB, C-terminal | Interproscan |
| IPR006359 | Family | Transcription elongation factor GreA | Interproscan |
| IPR018151 | Conserved_site | Transcription elongation factor, GreA/GreB, conserved site | Interproscan |
| IPR022691 | Domain | Transcription elongation factor, GreA/GreB, N-terminal | Interproscan |
| IPR023459 | Family | Transcription elongation factor GreA/GreB family | Interproscan |
| IPR028624 | Family | Transcription elongation factor GreA/GreB | Interproscan |
| IPR036805 | Homologous_superfamily | Transcription elongation factor, GreA/GreB, N-terminal domain superfamily | Interproscan |
| IPR036953 | Homologous_superfamily | Transcription elongation factor GreA/GreB, C-terminal domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR30437 | TRANSCRIPTION ELONGATION FACTOR GREA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006354 | Biological Process | DNA-templated transcription elongation | Interproscan |
| GO:0032784 | Biological Process | regulation of DNA-templated transcription elongation | Interproscan |
| GO:0070063 | Molecular Function | RNA polymerase binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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