Gene detail

Detailed information of pred2_50919.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_50919.1	UNCHARACTERIZED	Sc3x4tf_486	1102358	1065190	-

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_50919.1

ATGAATGCCGCTAAGAAAAATACTGGTACTTATCCCACAACTCGCAAAGAAGCTGCAAATACTGCAGCTGGTAAGAAAGCACAATTAGAAGCCAAACAGTACCAGAGAATGCGCCACTCCTTTTTTACTAATTTATTATTGCTTGGATTTGACAAAGAAGCCAACGAGAAAAAAGATAATGTTATTTACAATGAAGACACATTTGTGGTGGCTAACAATAAAGGTGCCTTAACAGTTCTATATTTTCTACTTAATAAATTGGATCCTGATGAATGTAAAAGTCGATTCAGATTGATGCTTCTTGGTACTGTGGCCCATATAGATACTGATGTACTGAAATTCAGATTCTTATTGTATGTCCAATTATTGTATGTCCACTTATTGTATGTACTTTCAGAGGAATTTGGCCAGTATTTGACAAAAAGCAAGAACAGAGTTTCCGGAAAGAAACTTGTGGAGGACTCTGAAGCTAACTTTTCACGCCTGAACCCTTCATTGTTTCTGTCGCCTGGAGGTTACAGATTCCAGTTGTTTTTGTTCCAATTCTCCAAATTCGTCATGCTGAAGTCTCTACAAAGAGATTGTGGGGTGGCCAAAGAGAGTTACCTGAGATGTCCTGTGCTGAAGACCCAGACTCCACAATTGACAGATGTTCAAGTGAAGATCCTAAAAAATACCACTGTTAGACACATGCGATCTTATGTGAATAATGTCCAACAATCTTTACAAGTTCATAGCAAATGGCACGAACAAGTTGGGGATATCGTAAAGAACTACAGAGTGTTGTGCAAGAAGGTTCGAGCACTGGAACGCAAAGAGAAACAAAATCTGGAGGAAAAAGAATCTGCTGAAAAGTGGGCTGGAGATAACCAAGTTAAGGATGAATCTCTTAAAAGTGTGAGGGAGGATTGGCTGAAATTTAGGAAGATAATCGAATCCCAAAATGAAGAATGTGAAATTATTAAATCCATCTTGCAAAACATTGCCAGCCATTACAAGATAGACCTGAACACGATCAATGCTAGTATTCCTGATTTGCTGCTTCGTGTGCAGGAACACCAGATTCAAGAGCGACAAATTGACAATCTGTACAAAGAAGGAAAACTAAATCTTGTCAGTTTAGTTCAGTTGCTGAATCTTTCTCTTGACATGTATTATGAAAAATTAAAATCTGCTGGCATTCCCAATACAAAAGAGAACATTTCCCCAATGCAACAAAAGTCAACCACTCACTCTAACCTCCTACAGAATATGCAGACTCTCAGAGAAAATATGAAAGAACAACTGCATTTACTGAAAAGTTCTGTTCATGAATCTGCAGAGGAAGCAGAAAAAAAAGCTATTGACCAAAAATTGTTGCCCATGGAATTCACCCTTAATGCTCCTACTCCACCAAGGAATTTCCAGCTGCTTTGTGATCGGTCCGTTCATGTGGATTCTCCTTTGACTGAACGGCGTCTGCCTGCTGAATCAATTGACACCCCCGAGGCTGCCAAAAAGATTCAAATGGCTGCCAAGGAAAATGCTTTGAAGGTGAAAGTTCAGAAAAAGACCCAAAGTGAATCAATTCTAGATCAACTGAGCCTGCCTCCTGAAGTGCAAGATGAGAGCCATGATGAGAAAAAAAGCAAGTTGCCTATAAAGGTTACAGAAGCTTTGTTAGGGGACAAGGATTCTACACCACAACTTAAAAACAACAAACCTTTGGATAAAGCTTCATTTAGGATGCAAATCCGGTCTTTAGCAGTGAAAGCTGGTTCTAAAAAAGGCAAAGGCATCCGAAGCAAATCATTGTCTGATTTCTCTGAGAAGAAAAGTGTTGATATCTGGGCAAATCAGGTTATAGACCATGTGATGGGAGTAACTGATGTTGATCCACAAAACATTAATGAAGCCCTTTAAAATATTCCTGAGATTGAAATCGATGCGGGCTCTCCTTCTCCTTGCCAAAAGAGTGTCAAACTGAAGTCTGCTTCCAGCATGACTGAACTGTATAGCAGTCCATTGTTTGCTTCAGATGATCCTGAAGACAAAGGCCTCAATGTGTCCCCTGCTTTTGCTGAGCGACGACAGTCTAATCAATCTGAAAACAGTCTAAATGCAGGCACTCCTCCCTGCCAAAAGAGTGTCAGTCTGAAGTCTGCTTCCACTTCCAGCATGACTGAACTGTATAGCAGTCCAGTGGTTGCTTCAGATGATCCTGAAGACAAAGGCCTCAGTGTGTCCCCTGCTTTTGCTGAGCGACGACAGTCTAATCAATCTGAAAAGAGTCTTGACATGAGTCTGGATGCGTACCTCCAGTTGCCTTCAAATCACAAAGGACTCGATCTGGATATATTCAATGATGTTCCCTGCCCCAAGATGCATTTCGGTGGTTTAAATCCTGGAGAAGATGCCTCAGACCGTATGACACTGACTGATAGTCTCAATCTCAAACCTACTCCCAACATTGAAAACATCTTGAAAGATTGCAGCTCCAAGAATATCTCTGAGCAACAGGACATTGATTGTTCAGATTATTTCACACCTCTGAAATATGGTCTACATTTAAAACGTACTTCAAAGTCAACTTTTTTGGAAGAGAAACCTGCAAACATTAACCAAAGTAGCTCGTTGGATTCTGCCCTGTCTACTTCCATGACTGCTTATAGCAATTCCCTTAAGGAAACTGAAGAAATGATATTTGAAGACACATGTAGCAGTGACCATTTTCCAATCATACTCGAGAACTCGGAAACTAACGAGAAAAATCGGGATGAATTTAAAACCAGTGCAATACAAAACAGCAACTCTGAGGATACATTCAGAAACACTAATCTCTATAGCAAAGGATTGCATACCAAAAAGCTCAACTTCAAATTAGTTGTACTTGGTTTGATGAGATTACGTAATGTCGCACTACGCAAATTCAGTAATTCACCTACTACTTCCAATTCCAACTCTTTTAAGATCCATAGAGCAAAGGCACGTAGAGTGATAAAAGAATCCAAGAAAAAATCTTGGAACTATGTGAGTAAACTCAATTCCTTCTCCAAATCAAAGAAAATGATTAGGAAAATCTCTGGCAAGAACCAATCAACCACTATAAAACACCTCTCAAAAGACAATGTCAAAAAAAAAAACTCCTCCAGTGAAAACAACTGCCAACCATTCCAAAAGATTAAGCAGAATGCCCCCCCCCCCCAAGAAAACTCGATTTTAAATCAAACAATTCTAAAGACTACAATATACCATTCACTAATAGATTCCATCAAAAGATTTCACAATACAACTGTCGGCCCAATTGAAATTCATTATGAATTTCTGAAACAATTACCAGAAAGTGCCCTTAACTATCTATTAACTGTTTTCAATGACATATGGATAAAGGGCAAAATCCCAGACACTTGGCGATGGAATGTTGGCTTGATCGTCATTGACGAAAAGTTCATGATAGGACAAAATATGTTCTATTACATCAGCAAGAGACTTCAGGAGGCCATACCGGAGAAGCCCGACCAACCGTTTGATGGCATGTCCACTGTCTTGCTCGGAGACTGGAAACAGCTACCACCAGTTCTTGACACTGCCCTGCACCGGGATCCCTCTGCACTAACAGGAAGAACAGCTGCAGCAATGCATAATGAGTTGAAGAAATCGGAGGCTAAAGGACAGGCACAGTTTCGGGAGGAGGAACATTCTGTAAGGGCTGACTGGGAAAGATGGAAGTATCTTGATCTCCTCTCACCGGCTGAACAATATGCTTTCTTCAGGGATGGAACGATGTCATGCGCCCTTAAAAAGACTTGCTTTTACACAATGAGAGGAAGGTTCAGGAGCTGCACGAGCCCATCGCCATCATTAAGGCCGAAAACAATCCCAGGTCAGGCAACCTCATTTGGACTACTGCAAGGCTGGCAAATGGAGCCGAGGGTGTGGGGTGCCACATATACGAGGCACGGAAGAAGCCACCAGAGCTACCTACTTTCCGAAATACAACCCCCAAACTGGAGAGAGGACATGCCAAAGATCATTCTGATAAGTCCTGTCACAAGGACGTGGTTCAGTCACAGAGCCCAGTGCACTAGGGTGCTGCTGCCCATGATCTTGGGTTATGTACTCTCCATACACAAGCTTCAAGGTAACACGGTGCCAGTCATCCTGAATGCTGGCGAACAAGAGTTTGTCCTTGCCCTTCTTCTTGTTGTAAGAACCAAGACGTTCGATGGCCTGGCCTTCAAGCCCTTTTCAAGCTTTGCACAGATTGGGAGGAAGTCCAGCATTAAGAGCCCGCAGCAACCGCCTAGTCAGGAGGCAAATAGATATAATCATGAGGTACAGGATTCAGAAATTGTC

Transcript

pred2_50919.1

ATGAATGCCGCTAAGAAAAATACTGGTACTTATCCCACAACTCGCAAAGAAGCTGCAAATACTGCAGCTGGTAAGAAAGCACAATTAGAAGCCAAACAGTACCAGAGAATGCGCCACTCCTTTTTTACTAATTTATTATTGCTTGGATTTGACAAAGAAGCCAACGAGAAAAAAGATAATGTTATTTACAATGAAGACACATTTGTGGTGGCTAACAATAAAGGTGCCTTAACAGTTCTATATTTTCTACTTAATAAATTGGATCCTGATGAATGTAAAAGTCGATTCAGATTGATGCTTCTTGGTACTGTGGCCCATATAGATACTGATGTACTGAAATTCAGATTCTTATTGTATGTCCAATTATTGTATGTCCACTTATTGTATGTACTTTCAGAGGAATTTGGCCAGTATTTGACAAAAAGCAAGAACAGAGTTTCCGGAAAGAAACTTGTGGAGGACTCTGAAGCTAACTTTTCACGCCTGAACCCTTCATTGTTTCTGTCGCCTGGAGGTTACAGATTCCAGTTGTTTTTGTTCCAATTCTCCAAATTCGTCATGCTGAAGTCTCTACAAAGAGATTGTGGGGTGGCCAAAGAGAGTTACCTGAGATGTCCTGTGCTGAAGACCCAGACTCCACAATTGACAGATGTTCAAGTGAAGATCCTAAAAAATACCACTGTTAGACACATGCGATCTTATGTGAATAATGTCCAACAATCTTTACAAGTTCATAGCAAATGGCACGAACAAGTTGGGGATATCGTAAAGAACTACAGAGTGTTGTGCAAGAAGGTTCGAGCACTGGAACGCAAAGAGAAACAAAATCTGGAGGAAAAAGAATCTGCTGAAAAGTGGGCTGGAGATAACCAAGTTAAGGATGAATCTCTTAAAAGTGTGAGGGAGGATTGGCTGAAATTTAGGAAGATAATCGAATCCCAAAATGAAGAATGTGAAATTATTAAATCCATCTTGCAAAACATTGCCAGCCATTACAAGATAGACCTGAACACGATCAATGCTAGTATTCCTGATTTGCTGCTTCGTGTGCAGGAACACCAGATTCAAGAGCGACAAATTGACAATCTGTACAAAGAAGGAAAACTAAATCTTGTCAGTTTAGTTCAGTTGCTGAATCTTTCTCTTGACATGTATTATGAAAAATTAAAATCTGCTGGCATTCCCAATACAAAAGAGAACATTTCCCCAATGCAACAAAAGTCAACCACTCACTCTAACCTCCTACAGAATATGCAGACTCTCAGAGAAAATATGAAAGAACAACTGCATTTACTGAAAAGTTCTGTTCATGAATCTGCAGAGGAAGCAGAAAAAAAAGCTATTGACCAAAAATTGTTGCCCATGGAATTCACCCTTAATGCTCCTACTCCACCAAGGAATTTCCAGCTGCTTTGTGATCGGTCCGTTCATGTGGATTCTCCTTTGACTGAACGGCGTCTGCCTGCTGAATCAATTGACACCCCCGAGGCTGCCAAAAAGATTCAAATGGCTGCCAAGGAAAATGCTTTGAAGGTGAAAGTTCAGAAAAAGACCCAAAGTGAATCAATTCTAGATCAACTGAGCCTGCCTCCTGAAGTGCAAGATGAGAGCCATGATGAGAAAAAAAGCAAGTTGCCTATAAAGGTTACAGAAGCTTTGTTAGGGGACAAGGATTCTACACCACAACTTAAAAACAACAAACCTTTGGATAaagcttcatttaggatgcaaATCCGGTCTTTAGCAGTGAAAGCTGGTTCTAAAAAAGGCAAAGGCATCCGAAGCAAATCATTGTCTGATTTCTCTGAGAAGAAAAGTGTTGATATCTGGGCAAATCAGGTTATAGACCATGTGATGGGAGTAACTGATGTTGATCCACAAAACATTAATGAAGCCCTTTAAAATATTCCTGAGATTGAAATCGATGCGGGCTCTCCTTCTCCTTGCCAAAAGAGTGTCAAACTGAAGTCTGCTTCCAGCATGACTGAACTGTATAGCAGTCCATTGTTTGCTTCAGATGATCCTGAAGACAAAGGCCTCAATGTGTCCCCTGCTTTTGCTGAGCGACGACAGTCTAATCAATCtgaaaacagtctaaatgcaggcactccTCCCTGCCAAAAGAGTGTCAGTCTGAAGTCTGCTTCCACTTCCAGCATGACTGAACTGTATAGCAGTCCAGTGGTTGCTTCAGATGATCCTGAAGACAAAGGCCTCAGTGTGTCCCCTGCTTTTGCTGAGCGACGACAGTCTAATCAATCtgaaaagagtcttgacatgagtctggatgcgtACCTCCAGTTGCCTTCAAATCACAAAGGACTCGATCTGGATATATTCAATGATGTTCCCTGCCCCAAGATGCATTTCGGTGGTTTAAATCCTGGAGAAGATGCCTCAGACCGTATGACACTGACTGATAGTCTCAATCTCAAACCTACTCCCAACATTGAAAACATCTTGAAAGATTGCAGCTCCAAGAATATCTCTGAGCAACAGGACATTGATTGTTCAGATTATTTCACACCTCTGAAATATGGTCTACATTTAAAACGTACTTCAAAGTCAACTTTTTTGGAAGAGAAACCTGCAAACATTAACCAAAGTAGCTCGTTGGATTCTGCCCTGTCTACTTCCATGACTGCTTATAGCAATTCCCTTAAGGAAACTGAAGAAATGATATTTGAAGacacatgtagCAGTGACCATTTTCCAATCATACTCGAGAACTCGGAAACTAACGAGAAAAATCGGGATGAATTTAAAACCAGTGCAATACAAAACAGCAACTCTGAGGATACATTCAGAAACACTAATCTCTATAGCAAAGGATTGCATACCAAAAAGCTCAACTTCAAATTAGTTGTACTTGGTTTGATGAGATTACGTAATGTCGCACTACGCAAATTCAGTAATTCACCTACTACTTCCAATTCCAACTCTTTTAAGATCCATAGAGCaaaggcacgtagagtgataaaagaatccaagaaaaaatcttggaactatgtgagtaaactcaattccttctccaaatcaaagaaaatgattaggaaaatctctggcaagaaccaatcaaccactataaaacacctctcaaaagacaatgtcaaaaaaaaaaactcctccagtgaaaacaactgccaaccattccaaaagattaagcagaatgccccccccccccaagaAAACTCGATTTTAAATCAAACAATTCTAAAGACTACAATATACCATTCACTAATAGATTCCATCAAAAGATTTCACAATACAACTGTCGGCCCAATTGAAATTCATTATGAATTTCTGAAACAATTACCAGAAAGtgcccttaactATCTATTAACTGTTTTCAATGACATATGGATAAAGGGCAAAATCCCAGACACTTGGCGATGGAATGTTGGCTTGATCGTCATTGACGAAAAGTTCATGATAGGACAAAATATGTTCTATTACATCAGCAAGAGACTTCAGGAGGCCATACCGGAGAAGCCCGACCAACCGTTTGATGGCATGTCCACTGTCTTGCTCGGAGACTGGAAACAGctaccaccagtTCTTGACACTGCCCTGCACCGGGATCCCTCTGCACTAACAGGAAGAACAGCTGCAGCAATGCATAATGAGTTGAAGAAATCGGAGGCTAAAGGACAGGCACAGTTTCGGGAGGAGGAACATTCTGTAAGGGCTGACTGGGAAAGATGGAAGTATCTTGATCTCCTCTCACCGGCTGAACAATATGCTTTCTTcagggatggaaCGATGTCATGCGCCCTTAAAAAGACTTGCTTTTACACAATGAGAGGAAGGTTCAGGAGCTGCACGAGCCCATCgccatcattaAGGCCGAAAACAATCCCAGGTCAGGCAACCTCATTTGGACTACTGCAAGGCTGGCAAATGGAGCCGAGGGTGTGGGGTGCCACATATACGAGGCACGGAAGAAGCCACCAGAGCTACCTACTTTCCGAAATACAACCCCCAAACTGGAGAGAGGACATGCCAAAGATCATTCTGATAAGTCCTGTCACAAGGACGTGGTTCAGTCACAGAGCCCAGTGCACTAGGGTGCTGCTGCCCATGATCTTGGGTTATGTACTCTCCATACACAAGCTTCAAGGTAACACGGTGCCAGTCATCCTGAATGCTGGCGAACAAGAGTTTGTCCTTGCCCTTCTTCTTGTTGTAAGAACCAAGACGTTCGATGGCCTGGCCTTCAAGCCCTTTTCAAGCTTTGCACAGATTGGGAGGAAGTCCAGCATTAAGAGCCCGCAGCAACCGCCTAGTCAGGAGGCAAATAGATATAATCATGAGGTACAGGATTCAGAAATTGTCTAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05970	PIF1	PIF1-like helicase	Family	Interproscan
PF14661	HAUS6_N	HAUS augmin-like complex subunit 6 N-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010285	Family	DNA helicase Pif1-like	Interproscan
IPR026797	Family	HAUS augmin-like complex subunit 6	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR028163	Domain	HAUS augmin-like complex subunit 6, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16151	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000226	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0000723	Biological Process	telomere maintenance	Interproscan
GO:0003678	Molecular Function	DNA helicase activity	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0051225	Biological Process	spindle assembly	Interproscan
GO:0070652	Cellular Component	HAUS complex	Interproscan
GO:1990498	Cellular Component	mitotic spindle microtubule	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-