| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_50307.1 | GATA-TYPE ZINC FINGER PROTEIN 1 | Sc3x4tf_517 | 2152881 | 2171145 | + |
| CDS | |||||
| pred2_50307.1 | |||||
| Transcript |
| pred2_50307.1 |
| Protein |
| pred2_50307.1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | zf-GATA |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00320 | GATA | GATA zinc finger | Domain | Interproscan |
| PF15086 | UPF0542 | Uncharacterised protein family UPF0542 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000679 | Domain | Zinc finger, GATA-type | Interproscan |
| IPR013088 | Homologous_superfamily | Zinc finger, NHR/GATA-type | Interproscan |
| IPR027877 | Family | Small integral membrane protein 15 | Interproscan |
| IPR053116 | Family | GATA-type Zinc Finger Regulator | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47341 | GATA-TYPE ZINC FINGER PROTEIN 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0007283 | Biological Process | spermatogenesis | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0043565 | Molecular Function | sequence-specific DNA binding | Interproscan |
| GO:0048599 | Biological Process | oocyte development | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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