Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
pred2_49701.1 | RAB GDP/GTP EXCHANGE FACTOR | Sc3x4tf_198 | 17726857 | 17788373 | + |
CDS | |||||
pred2_49701.1 | |||||
Transcript |
pred2_49701.1 |
Protein |
pred2_49701.1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00017 | SH2 | SH2 domain | Domain | Interproscan |
PF00788 | RA | Ras association (RalGDS/AF-6) domain | Domain | Interproscan |
PF02204 | VPS9 | Vacuolar sorting protein 9 (VPS9) domain | Family | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000159 | Domain | Ras-associating domain | Interproscan |
IPR000980 | Domain | SH2 domain | Interproscan |
IPR003123 | Domain | VPS9 domain | Interproscan |
IPR029071 | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
IPR036860 | Homologous_superfamily | SH2 domain superfamily | Interproscan |
IPR037191 | Homologous_superfamily | VPS9 domain superfamily | Interproscan |
IPR045046 | Family | Vacuolar protein sorting-associated protein 9-like | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR23101 | RAB GDP/GTP EXCHANGE FACTOR | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0005085 | Molecular Function | guanyl-nucleotide exchange factor activity | Interproscan |
GO:0005829 | Cellular Component | cytosol | Interproscan |
GO:0007165 | Biological Process | signal transduction | Interproscan |
GO:0016192 | Biological Process | vesicle-mediated transport | Interproscan |
GO:0030139 | Cellular Component | endocytic vesicle | Interproscan |
GO:0031267 | Molecular Function | small GTPase binding | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |