Gene detail

Detailed information of pred2_49004.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_49004.1	PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE	Sc3x4tf_254.2	15648276	15606840	-

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_49004.1

ATGGTACTTACTCAATTCTATCGCAGTCATGCACTGACGTCTGGTCGTGGGGAAGTTATACTGCAGAAGCTGAGATCATTGGTTGAGGCTGGTAAAATTGAGAGGCTTGAAACAGAAACCTCATTCTACATTTCTTGTAAAGATGATGAGTTGTCTGAAAAGGAAGAGCGAAAACTGATGTGGATTTTAAGCAAGCCTTTCTCACCAAATGATTTATCAAAGACAACGTTTTTCAAGATCATTCCTGAAAATGGTTTGAGAATTGAAATTGGACCAAGGTTGAACTTTTCAACTGCATTTTCTACCAATGCGGTTTCTATCTGTCATTCTATTGGACTGAAGAATATTGATCGAATAGAATCTTCGCTGATTTATTTGTTGACTCCTATTGATGGCAAAAGCTTTTCAAAAGAAGAAGAAAACAAAATGGTGGCTGCTCTGCATGATCAGATGACCCAATGTCGATATGTTGAACCCCTGAAAACATTTGATCTGAACATAGAATCAGAACCTGTATTTGATGTGGATGTTCTTGGTTCTGGTCTTTCTGCTTTGGATAAAGCAAATAAAGATCTTGGACTTGCATTTGATGATTGGGATCTTGATTATTACACCAACCTTTTCAAAGAGAAGATCAAACGTAACCCAACAAGTGTCGAGTGCTTTGATCTGGCACAGTCCAACAGTGAGCATAGCCGTCATTGGTTTTTCAAAGGGAAGTTGTTTGTTGATGGCCAGGAGCAAAAAGAATCTTTGTTTCAAATGATTATGGATACACAAAACCACAGCAACAATAACAATGTTATCAAATTCAATGACAACAGCAGTGCATTGGAAGGTTATACAGTGGACATATTGGCTCCTGAAGACCCTTGCTCTGCCAGTCCTTTGAAGATAAGGGAAGGAACTAAACGGCATATCATTTTTACTGCTGAAACTCACAATTTTCCTACAGGTGTTGCTCCGTTTCCTGGAGCCACAACTGGAACAGGAGGTCGTATACGAGATGTTCACAGCACTGGACGAGGGGCACATGTGGTAGCTGGCACTGCTGGGTACAGTTTTGGAAATCTCCACATTCCTGATTATGTCCTGCCATGGGAAGAAGAAAATACCTATAATGGACCCATGAAATTTGCAGCTCCTGTAGATGTTGCAGTAGAAGCTAGTAATGGAGCTTCAGATTATGGTAATAAATTTGGTGAACCAGTTTTAACTGGTTTTGCTAGATCATTTGGTCTCACCCTTCCTGGTGGGGAACGGAGAGAATATATAAAACCTATCATGTTCAGTGCTGGAATTGGAATGTTGGAGGATCTACATATCAAAAAGAAGACTGCAGAAAAAGGTATGGAAGTTGTGAAGATTGGTGGGCCTGTTTACCGTATTGGTGTTGGGGGAGGAGCAGCTTCATCAGTTCAGGTACAAGGAGACAATAAAGCAGACTTGGATTTTGGTGCAGTCCAGCGAGGAGATGCAGAAATGGAGCAGAAACTGAATCGTTTTATCCGTTCTTGTGTGGAACTTCATGAATCAAATCCCATTCTCAGCATCCATGACCAAGGAGCTGGCGGAAATGGAAATGTCTTGAAAGAAATTGTAGAGCCAGCAGGCGCTGAGATTTTTGCTGATACTTTCCAGTTAGGAGATCCTACTCTCAGCATCCTAGAACTGTGGGGTGCTGAGTATCAGGAATCAGATGCTATATTAAGCATGCCTGAGAACAGGAAAGTTCTGGAATCGATTGGTCAAAGAGAGCGTTGTCCTGTCAATTTTGTTGGCACCGTCACTGGAGATAAAAAGATAAAATTAAAGAATTACACTTCAAGATCTGATGAATCTGCAGATTCTAAAAAGCGGAAGATAGAATATGAATATCCAGTCAACTTGGAATTAGATCATGTGCTTGGGTCAATGCCTCAGAAATCCCTTCAACATCTCCTCAGCAGCTGCCCCAAGGGATTGACCAACGGATGCTACTGGTGGCGCCATGACCAGAGGCTCAAGGCAGTTGCAGAAGCAGTCACCAGCGCCATTCACTCCAGTAAACACCACCCCATAAGGAAAACCATCCATTTTCTTAAAGCCGGAGAGAAGCCCCATTCTGAATTTAAACTTGATCATATCAAATCTGAATTGAAACCGTTATCACTTCCCACTGACCTGACTTTGATGAAGGCAATTGATAGAGTATTGAGACTACCTTCAGTTGCCAGTAAGAGATACTTGACAAATAAGGTTGATCGTTCTGTGACTGGACTTGTTGCTCAACAACAGTGTGTGGGTTACCTCCATACTCCTCTGGCAGATGTTGCTGTGACAGCTCTTTCCTACTTTGATACTGTTGGGTCTGCTACATCCATAGGTGAACAGCCTATCAAAGGTTTGGTTGATCCTGCGTGTGGAGCCCGTATGACTGTGGGTGAATGCCTCACAAACTTGGTTTTTGCCAGAATTACAGATCTGAAGGATGTAAAATGCAGTGGAAACTGGATGTGGCCTGCTAAACTCCCTGGCGAAGGTGCTGCCTTGTATGATACGTGCAAAGCCATGTGCAATGTGATGAAGAAACTAAAAATTGCCATTGATGGGGGCAAAGATTCTCTAAGCATGGCGGCACGTGTTGGGTCACAAACAGTCAAAGCCCCTGGTACTCTTGTGGTTTCTGCATATGTTGGTTGTCCAGATATTAAAGCTACTGTCACCCCTGATTTGAAATGTCCTCAGGGTAAAGGTATTCTTCTGCATATTGATCCTAGTTGTGGCAAACATCGCCTTGGGGGATCAGCTTTGGCACAGTGCTTCAAGCAGATTGGAAATGAGTCTCCTGACTTAGATAATCCAAATGTGTTCATAAATATGTTTAATGTCACTCAGCAGTGCATTGCAGAGAAATTAATATCTGCTGGACATGATGTAAGTGACGGTGGTTTGCTAACTTGTGTACTGGAAATGGCCTTTGCAGGAAACGTTGCCATCAGTCTCAATTTTGAAGGATCAGCAGAGGCATCTATTTTTGAATTGTTGTTCTCTGAAGAACTTGGTTTAGTGCTAGAAGTTAGCACTGAAAACAAAGAAAAGGTGATGAAGATGTATCGAGAAGCTGATGTCCATTGTATTCAAATTGGCTCCTGTTCTGACAGTGAGGAAAAATCTCCCCAGGTGCAAGTCAGTGTTTCTGAGGAACTGATTTTAGACTCTTCGCTGTCAAATCTTCGTAACATTTGGGAAGAGACCAGTTATCATTTAGAGAAGAGACAGGCCAATCCTCCTTGTGTTGAAGAAGAAAGAAATTCATTGATGAAGAGAACCCAACCACAATTTACTTTGGTTTTTGACCCAAATATGTTGTACGATGTGAATTCTCTGAGATGGGCTGCAACTGCACTGTTCAATAAAAATGTGAGACAACAATTCGAAGACTTTTTTGACCGTCCTGATACATTCAGTTTGGGAGTTTGCAATGGTTGCCAACTGATGGCTCTTCTTGGCTGGGTTGTCCCAGATGAAGACAATAATGATCCTGATTCTCCCCCACAAGGTTTGTTGTTGGATGAAAACAAGTCGGAAAGGTTTGAGTCTCGTTTTGTTTCTGTGAAGATCAATAAGAGTCCATCCATAATGTTAAAAGGAATGGAAGGTACCACCTTTGGAGTGTGGGTTGCACATGGTGAAGGAAAAATGGTCTTCAAATCAGAATCTTTGCATACAAAAGCCACATTAAAAAATCTGATTCCAGTCCAGTATGTTGATGACAGTGGAGAACCAACTTCTTGTTATCCATTTAATCCAAACGGTTCTCCTGATGGTATTGCGGCTGTCTGTTCTGATGATGGACGTCACCTTGCCATTATGCCCCACCCAGAGAGATCGTTTTTAGCATGGCAGTGTCCCTGGATGCCATTAGACATGAGGGCTAGGCTGAAAGTTACCCCATGGCTGAAGATGTTCACAAATGCCCATGATTGGTGCCTTAAAGATTGC

Transcript

pred2_49004.1

ATGGTACTTACTCAATTCTATCGCAGTCATGCACTGACGTCTGGTCGTGGGGAAGTTATACTGCAGAAGCTGAGATCATTGGTTGAGGCTGGTAAAATTGAGAGGCTTGAAACAGAAACCTCATTCTACATTTCTTGTAAAGATGATGAGTTGTCTGAAAAGGAAGAGCGAAAACTGATGTGGATTTTAAGCAAGCCTTTCTCACCAAATGATTTATCAAAGACAACGTTTTTCAAGATCATTCCTGAAAATGGTTTGAGAATTGAAATTGGACCAAGGTTGAACTTTTCAACTGCATTTTCTACCAATGCGGTTTCTATCTGTCATTCTATTGGACTGAAGAATATTGATCGAATAGAATCTTCGCTGATTTATTTGTTGACTCCTATTGATGGCAAAAGCTTTTCAAAAGAAGAAGAAAACAAAATGGTGGCTGCTCTGCATGATCAGATGACCCAATGTCGATATGTTGAACCCCTGAAAACATTTGATCTGAACATAGAATCAGAACCTGTATTTGATGTGGATGTTCTTGGTTCTGGTCTTTCTGCTTTGGATAAAGCAAATAAAGATCTTGGACTTGCATTTGATGATTGGGATCTTGATTATTACACCAACCTTTTCAAAGAGAAGATCAAACGTAACCCAACAAGTGTCGAGTGCTTTGATCTGGCACAGTCCAACAGTGAGCATAGCCGTCATTGGTTTTTCAAAGGGAAGTTGTTTGTTGATGGCCAGGAGCAAAAAGAATCTTTGTTTCAAATGATTATGGATACACAAAACCACAGCAACAATAACAATGTTATCAAATTCAATGACAACAGCAGTGCATTGGAAGGTTATACAGTGGACATATTGGCTCCTGAAGACCCTTGCTCTGCCAGTCCTTTGAAGATAAGGGAAGGAACTAAACGGCATATCATTTTTACTGCTGAAACTCACAATTTTCCTACAGGTGTTGCTCCGTTTCCTGGAGCCACAACTGGAACAGGAGGTCGTATACGAGATGTTCACAGCACTGGACGAGGGGCACATGTGGTAGCTGGCACTGCTGGGTACAGTTTTGGAAATCTCCACATTCCTGATTATGTCCTGCCATGGGAAGAAGAAAATACCTATAATGGACCCATGAAATTTGCAGCTCCTGTAGATGTTGCAGTAGAAGCTAGTAATGGAGCTTCAGATTATGGTAATAAATTTGGTGAACCAGTTTTAACTGGTTTTGCTAGATCATTTGGTCTCACCCTTCCTGGTGGGGAACGGAGAGAATATATAAAACCTATCATGTTCAGTGCTGGAATTGGAATGTTGGAGGATCTACATATCAAAAAGAAGACTGCAGAAAAAGGTATGGAAGTTGTGAAGATTGGTGGGCCTGTTTACCGTATTGGTGTTGGGGGAGGAGCAGCTTCATCAGTTCAGGTACAAGGAGACAATAAAGCAGACTTGGATTTTGGTGCAGTCCAGCGAGGAGATGCAGAAATGGAGCAGAAACTGAATCGTTTTATCCGTTCTTGTGTGGAACTTCATGAATCAAATCCCATTCTCAGCATCCATGACCAAGGAGCTGGCGGAAATGGAAATGTCTTGAAAGAAATTGTAGAGCCAGCAGGCGCTGAGATTTTTGCTGATACTTTCCAGTTAGGAGATCCTACTCTCAGCATCCTAGAACTGTGGGGTGCTGAGTATCAGGAATCAGATGCTATATTAAGCATGCCTGAGAACAGGAAAGTTCTGGAATCGATTGGTCAAAGAGAGCGTTGTCCTGTCAATTTTGTTGGCACCGTCACTGGAGATAAAAAGATAAAATTAAAGAATTACACTTCAAGATCTGATGAATCTGCAGATTCTAAAAAGCGGAAGATAGAATATGAATATCCAGTCAACTTGGAATTAGATCATGTGCTTGGGTCAATGCCTCAGAAATCCCTTCAACATCTCCTCAGCAGCTGCCCCAAGGGATTGACCAACGGATGCTACTGGTGGCGCCATGACCAGAGGCTCAAGGCAGTTGCAGAAGCAGTCACCAGCGCCATTCACTCCAGTAAACACCACCCCATAAGGAAAACCATCCATTTTCTTAAAGCCGGAGAGAAGCCCCATTCTGAATTTAAACTTGATCATATCAAATCTGAATTGAAACCGTTATCACTTCCCACTGACCTGACTTTGATGAAGGCAATTGATAGAGTATTGAGACTACCTTCAGTTGCCAGTAAGAGATACTTGACAAATAAGGTTGATCGTTCTGTGACTGGACTTGTTGCTCAACAACAGTGTGTGGGTTACCTCCATACTCCTCTGGCAGATGTTGCTGTGACAGCTCTTTCCTACTTTGATACTGTTGGGTCTGCTACATCCATAGGTGAACAGCCTATCAAAGGTTTGGTTGATCCTGCGTGTGGAGCCCGTATGACTGTGGGTGAATGCCTCACAAACTTGGTTTTTGCCAGAATTACAGATCTGAAGGATGTAAAATGCAGTGGAAACTGGATGTGGCCTGCTAAACTCCCTGGCGAAGGTGCTGCCTTGTATGATACGTGCAAAGCCATGTGCAATGTGATGAAGAAACTAAAAATTGCCATTGATGGGGGCAAAGATTCTCTAAGCATGGCGGCACGTGTTGGGTCACAAACAGTCAAAGCCCCTGGTACTCTTGTGGTTTCTGCATATGTTGGTTGTCCAGATATTAAAGCTACTGTCACCCCTGATTTGAAATGTCCTCAGGGTAAAGGTATTCTTCTGCATATTGATCCTAGTTGTGGCAAACATCGCCTTGGGGGATCAGCTTTGGCACAGTGCTTCAAGCAGATTGGAAATGAGTCTCCTGACTTAGATAATCCAAATGTGTTCATAAATATGTTTAATGTCACTCAGCAGTGCATTGCAGAGAAATTAATATCTGCTGGACATGATGTAAGTGACGGTGGTTTGCTAACTTGTGTACTGGAAATGGCCTTTGCAGGAAACGTTGCCATCAGTCTCAATTTTGAAGGATCAGCAGAGGCATCTATTTTTGAATTGTTGTTCTCTGAAGAACTTGGTTTAGTGCTAGAAGTTAGCACTGAAAACAAAGAAAAGGTGATGAAGATGTATCGAGAAGCTGATGTCCATTGTATTCAAATTGGCTCCTGTTCTGACAGTGAGGAAAAATCTCCCCAGGTGCAAGTCAGTGTTTCTGAGGAACTGATTTTAGACTCTTCGCTGTCAAATCTTCGTAACATTTGGGAAGAGACCAGTTATCATTTAGAGAAGAGACAGGCCAATCCTCCTTGTGTTGAAGAAGAAAGAAATTCATTGATGAAGAGAACCCAACCACAATTTACTTTGGTTTTTGACCCAAATATGTTGTACGATGTGAATTCTCTGAgatgggctgcaactgcactgttcaataaaaatgtgagacaacaattcgaagacttttttgaccgtcctgatacattcagtttgggagtttgcaatggttgccaactgatggctcttcttggctgggttgtcccagatgaagacaataatgATCCTGATTCTCCCCCACAAGGTTTGTTGTTGGATGAAAACAAGTCGGAAAGGTTTGAGTCTCGTTTTGTTTCTGTGAAGATCAATAAGAGTCCATCCATAATGTTAAAAGGAATGGAAGGTACCACCTTTGGAGTGTGGGTTGCACATGGTGAAGGAAAAATGGTCTTCAAATCAGAATCTTTGCATACAAAAGCCACATTAAAAAATCTGATTCCAGTCCAGTATGTTGATGACAGTGGAGAACCAACTTCTTGTTATCCATTTAATCCAAACGGTTCTCCTGATGGTATTGCGGCTGTCTGTTCTGATGATGGACGTCACCTTGCCATTATGCCCCACCCAGAGAGATCGTTTTTAGCATGGCAGTGTCCCTGGATGCCATTAGACATGAGGGCTAGGCTGAAAGTTACCCCATGGCTGAAGATGTTCACAAATGCCCATGATTGGTGCCTTAAAGATTGCTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02769	AIRS_C	AIR synthase related protein, C-terminal domain	Domain	Interproscan
PF13507	GATase_5	CobB/CobQ-like glutamine amidotransferase domain	Domain	Interproscan
PF18072	FGAR-AT_linker	Formylglycinamide ribonucleotide amidotransferase linker domain	Domain	Interproscan
PF18076	FGAR-AT_N	Formylglycinamide ribonucleotide amidotransferase N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010918	Domain	PurM-like, C-terminal domain	Interproscan
IPR029062	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR036604	Homologous_superfamily	Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily	Interproscan
IPR036676	Homologous_superfamily	PurM-like, C-terminal domain superfamily	Interproscan
IPR036921	Homologous_superfamily	PurM-like, N-terminal domain superfamily	Interproscan
IPR040707	Domain	Phosphoribosylformylglycinamidine synthase, N-terminal	Interproscan
IPR041609	Domain	Phosphoribosylformylglycinamidine synthase, linker domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10099	PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-