Gene detail

Detailed information of pred2_47477.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_47477.1	TRAFFICKING KINESIN-BINDING PROTEIN	Sc3x4tf_135.2	3391249	3526230	+

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_47477.1

ATGAATGAGACGGGTATAACAGATCAAGATCAGTGCCTTGAGGCATTGGTGAGACCTGAGAAATCGTGTCTCCTCTCCCATGAATTTACTGCAGCCCACTGTGTGGGCGTTTTAGAATGCGTACCCGACTCTGTCAAGCTGGCATCACATGATCAAGGGCAGGTAGACTCACCCAAGACAAGCACTGATGTGTATGAAACTAATCATGATAAGCGTTGGATGAATCCTCGAGTTGATGCCAGTGTTATAACAGACGTGTGTAACCGGGCAGATTTACCTGAAGTTGAGATCCTTAGTCTTCTTGAAGAACAGATCCCTAAGTATAAACTTCGGGCTGATACTATCACTGATTTCCGTGGCTACGATAACGAAGACTGGATACAAACCCCTCTTATTCCCTTAGATGACGACCTTGAACTTACTACAGAACAAATTGAAGAGACATTGAAATACTTCATCTTATGCGCACAGCGTGTAACCCAGATGACTAGAACATACAATGATATTGAGGCTGTGACTCGTCTACTCGAAGAGGAATTATTATTCAGAGGCTGCATCTACGTGGATCTAGCACTCCCATACTGTGACAGAAAACCAGCAAAGTCTGGTGGTATCATGAGGTACTGCTGGGGTGCCCTGGTTCCCAGAGCCAGTTTCGTTTATATGATGGATGTCATCATAGAACCCGCGCACTTACCATGTCGCAAAAAGGGTCAATCTACCACAAATGCTGTAGATAAACTTCTGACCGTTGTTGAAAGGAAAGAACGAGATCTTGAACTTGCAGCACGTATTGGTCAAACACTTCTTGAGAAAAATAAGGAATTATCTGATAAGACAGACCACTTAGAGGACCAGCTCAGCACTGCGAATGACAAAGTTAGCCAATTGAAACATGAAATTTCTATGAAAGATGAGTTGCTACGGTTTTATACACAAGACTTGGAAAATGCAGAGTGTGAATCCCCAAGCAGTACTCCCGAGAAGGGCTTCAGTTTATCAAATGTCAATGTGGACTCCTTGCAGAAGAAGGTGCGAATTCTGGAAGATGACAACTTACAACTTCGTCTTGAGACCTCACAACTTGCTTCCGTCACTGAGGACTATGAGGAGAAAGAAGAGAAGTTGGTGCAAGACTGCCTCAAACAACTGGCTGATGTCAACAGCCAGTTGGAGGTCTTCTCTGATGAGCTTGCACGAAAGACGGAGGAGAGTTCTCACCAGAAAGAGGAGATTACAAATCTCTTAACCCAGATAGTGGAGCTGCAAAGGAAGAATCGTGAGATCTCTTTTGAGAACCTTGAGTATCACAAAAAGTTGGAAGCAGCAAAGGATTCACAGCAGAAATTAACTATAGAGTTAGCGGAATGGCAGGACCGGTATGATGAACTTATGGAATTATTTGAAGAAGTCCAGGATGAGTTGCGCACACTTCGTCGGAAACACAAGCCAAGTGCCTCCAAGCACTTTACGTCATCAACATCACTGATGAGAGGTGATTCATTGGCTTCCGAATTAGAAACTTCAATGCGTAGTGAAATTGAGTATCCTCACGGCTACTCACCTGCTGAGAGAAGGATTCATAATTGGAAAATATTTGAAACTGCTCGAGCTGCTAAAAGAGCAACTCAAAAAATGAAAGAACGACGTAGCAGCTCCCTTCTACTCAAGGTGCCAAGTGGTGAAAGCAGTACGGAGTCCGCATCAACATCTGTGAGAAGTTCGTTGTATCTCTCCGATGGAGAGTCCTTTGCTAGCGATGGCTACAATGCTGATCTAGAAAGTGTTTGTGGTTCCAATTCCAACCAGCTTGGCCGCCCTGGCATTCCCGGTTCCAATGATTTAGAAACAGCTCTTCGCCGTTTATTGGTAAAACGTAATTGGGGATTACCAGACAAAGACGGCAAGACTGTTCCTGGATCTACTAAGCATGCAGAACTACTGCAAAGGAGCATTATGGAACAAAGTTTCAGTGAGGGTTTAAGCGCCTCCATGTTCAGCACGACCCCCGAAAGTATGGTATCTTCAGATAGTACCATGTCTGGATTATCAGCCACTGGGGGTGCAGGTGTTCACTTCAAGATCCCAGAAAAGCTTCAGATTGTCAAACCAATGGAAGGTTCTGTTACTCTTCGACATTGGCAGCAACTTGCCCAGCCGCACATAAGTGGCATTTTTGAGACCCGACCGGGAGTTCAAATAAAAGGAGAGAAGAAAATTGATATTGAAGAAGAAGTTTACAATCTTAGTGATTTAGAAGAGGATGATGAATACCAATCGTGCCCAAGCAAAAGATTCCCTCAGAGTTCCACAATTTACACCTACACTGACTCAACCGTTATGCATCCATCAGATCAGCATTATAGCCATGTGAAGGAACCCTCAGATCAATCAAAATCGATAAAAAGGCTGTGGGACAAGATGAAGCAAAATAAACAAGATACTAAGAAAGTGAAAGAAAATAGCCAGAGCAAACAAGAAACTGACGTGCCTTCCATCCCTGGCTCTGGGAAAGCAAACTCCAATAAAACTGCTGACACAACTACCTATAGCATGTCTTTGGGCCTGGCAGCTATCCTAAACGAACGTGGCCTCGGAGAGTCTTGGAAATTTGGTCGAAGACGCAAGGGTAATTCTTTGAGTCCTGGTGGCGATGGAGCAACCAGCGATGATTCCTATTCTGGATCCGGCATTTACACCCGCTCCGGCGGCTCCAGCAGTGAGGTAACACCAACTCATACCCTGCGGAAAAAGGTTTCCACTCTACAGGATAACAATGCTAATAGCACTGGTAGTGCCACGCCCACCACTGACACAACACCAACAGAGAGCCCTGCCAAAACGCAATCAGTTGGTGCCTCATTTTTGAACACTCTGAAATCAAAGGGCTTCTCAATCTACGGCATTTTATCCTCGCCCTCATCGGACAATAACAATCAATCGGGAGACAGTACTGCTGCTGATTCAGATAGTTCGGTTGCATGTGATGCCTCAGCCATCAAAACAACCGCAGGGGCTGCTCAGTGTACGACGACGTCTTCGGCAGAGGCTGTCCAACAAGACAATAATCAAAATAACAATAGGAACTCTGAAGTCACTTCAAACAGAGTCTTTGATGAAATTGGGGGTCTGAATGTTGACCACATTGGAAGACAAGGCAAGAACAAGAGGGAT

Transcript

pred2_47477.1

ATGAATGAGACGGGTATAACAGATCAAGATCAGTGCCTTGAGGCATTGGTGAGACCTGAGAAATCGTGTCTCCTCTCCCATGAATTTACTGCAGCCCACTGTGTGGGCGTTTTAGAATGCGTACCCGACTCTGTCAAGCTGGCATCACATGATCAAGGGCAGGTAGACTCACCCAAGACAAGCACTGATGTGTATGAAACTAATCATGATAAGCGTTGGATGAATCCTCGAGTTGATGCCAGTGTTATAACAGACGTGTGTAACCGGGCAGATTTACCTGAAGTTGAGATCCTTAGTCTTCTTGAAGAACAGATCCCTAAGTATAAACTTCGGGCTGATACTATCACTGATTTCCGTGGCTACGATAACGAAGACTGGATACAAACCCCTCTTATTCCCTTAGATGACGACCTTGAACTTACTACAGAACAAATTGAAGAGACATTGAAATACTTCATCTTATGCGCACAGCGTGTAACCCAGATGACTAGAACATACAATGATATTGAGGCTGTGACTCGTCTACTCGAAGAGGAATTATTATTCAGAGGCTGCATCTACGTGGATCTAGCACTCCCATACTGTGACAGAAAACCAGCAAAGTCTGGTGGTATCATGAGGTactgctggggtGCCCTGGTTCCCAGAGCCAGTTTCGTTTATATGATGGATGTCATCATAGAACCCGCGCACTTACCATGTCGCAAAAAGGGTCAATCTACCACAAATGCTGTAGATAAACTTCTGACCGTTGTTGAAAGGAAAGAACGAGATCTTGAACTTGCAGCACGTATTGGTCAAACACTTCTTGAGAAAAATAAGGAATTATCTGATAAGACAGACCACTTAGAGGACCAGCTCAGCACTGCGAATGACAAAGTTAGCCAATTGAAACATGAAATTTCTATGAAAGATGAGTTGCTACGGTTTTATACACAAGACTTGGAAAATGCAGAGTGTGAATCCCCAAGCAGTACTCCCGAGAAGGGCTTCAGTTTATCAAATGTCAATGTGGACTCCTTGCAGAAGAAGGTGCGAATTCTGGAAGATGACAACTTACAACTTCGTCTTGAGACCTCACAACTTGCTTCCGTCACTGAGGACTATGAGGAGAAAGAAGAGAAGTTGGTGCAAGACTGCCTCAAACAACTGGCTGATGTCAACAGCCAGTTGGAGGTCTTCTCTGATGAGCTTGCACGAAAGACGGAGGAGAGTTCTCACCAGAAAGAGGAGATTACAAATCTCTTAACCCAGATAGTGGAGCTGCAAAGGAAGAATCGTGAGATCTCTTTTGAGAACCTTGAGTATCACAAAAAGTTGGAAGCAGCAAAGGATTCACAGCAGAAATTAACTATAGAGTTAGCGGAATGGCAGGACCGGTATGATGAACTTATGGAATTATTTGAAGAAGTCCAGGATGAGTTGCGCACACTTCGTCGGAAACACAAGCCAAGTGCCTCCAAGCACTTTACGTCATCAACATCACTGATGAGAGGTGATTCATTGGCTTCCGAATTAGAAACTTCAATGCGTAGTGAAATTGAGTATCCTCACGGCTACTCACCTGCTGAGAGAAGGATTCATAATTGGAAAATATTTGAAACTGCTCGAGCTGCTAAAAGAGCAACTCAAAAAATGAAAGAACGACGTAGCAGCTCCCTTCTACTCAAGGTGCCAAGTGGTGAAAGCAGTACGGAGTCCGCATCAACATCTGTGAGAAGTTCGTTGTATCTCTCCGATGGAGAGTCCTTTGCTAGCGATGGCTACAATGCTGATCTAGAAAGTGTTTGTGGTTCCAATTCCAACCAGCTTGGCCGCCCTGGCATTCCCGGTTCCAATGATTTAGAAACAGCTCTTCGCCGTTTATTGGTAAAACGTAATTGGGGATTACCAGACAAAGACGGCAAGACTGTTCCTGGATCTACTAAGCATGCAGAACTACTGCAAAGGAGCATTATGGAACAAAGTTTCAGTGAGGGTTTAAGCGCCTCCATGTTCAGCACGACCCCCGAAAGTATGGTATCTTCAGATAGTACCATGTCTGGATTATCAGCCACTGGGGGTGCAGGTGTTCACTTCAAGATCCCAGAAAAGCTTCAGATTGTCAAACCAATGGAAGGTTCTGTTACTCTTCGACATTGGCAGCAACTTGCCCAGCCGCACATAAGTGGCATTTTTGAGACCCGACCGGGAGTTCAAATAAAAGGAGAGAAGAAAATTGATATTGAAGAAGAAGTTTACAATCTTAGTGATTTAGAAGAGGATGATGAATACCAATCGTGCCCAAGCAAAAGATTCCCTCAGAGTTCCACAATTTACACCTACACTGACTCAACCGTTATGCATCCATCAGATCAGCATTATAGCCATGTGAAGGAACCCTCAGATCAATCAAAATCGATAAAAAGGCTGTGGGACAAGATGAAGCAAAATAAACAAGATACTAAGAAAGTGAAAGAAAATAGCCAGAGCAAACAAGAAACTGACGTGCCTTCCATCCCTGGCTCTGGGAAAGCAAACTCCAATAAAACTGCTGACACAACTACCTATAGCATGTCTTTGGGCCTGGCAGCTATCCTAAACGAACGTGGCCTCGGAGAGTCTTGGAAATTTGGTCGAAGACGCAAGGGTAATTCTTTGAGTCCTGGTGGCGATGGAGCAACCAGCGATGATTCCTATTCTGGATCCGGCATTTACACCCGCTCCGGCGGCTCCAGCAGTGAGGTAACACCAACTCATACCCTGCGGAAAAAGGTTTCCACTCTACAGGATAACAATGCTAATAGCACTGGTAGTGCCACGCCCACCACTGACACAACACCAACAGAGAGCCCTGCCAAAACGCAATCAGTTGGTGCCTCATTTTTGAACACTCTGAAATCAAAGGGCTTCTCAATCTACGGCATTTTATCCTCGCCCTCATCGGACAATAACAATCAATCGGGAGACAGTACTGCTGCTGATTCAGATAGTTCGGTTGCATGTGATGCCTCAGCCATCAAAACAACCGCAGGGGCTGCTCAGTGTACGACGACGTCTTCGGCAGAGGCTGTCCAACAAGACAATAATCAAAATAACAATAGGAACTCTGAAGTCACTTCAAACAGAGTCTTTGATGAAATTGGGGGTCTGAATGTTGACCACATTGGAAGACAAGGCAAGAACAAGAGGGATTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04849	HAP1_N	HAP1 N-terminal conserved region	Family	Interproscan
PF12448	Milton	Kinesin associated protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006933	Domain	HAP1, N-terminal	Interproscan
IPR022154	Domain	Trafficking kinesin-binding protein, C-terminal	Interproscan
IPR051946	Family	Intracellular Trafficking Regulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15751	TRAFFICKING KINESIN-BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006605	Biological Process	protein targeting	Interproscan
GO:0017022	Molecular Function	myosin binding	Interproscan
GO:0031410	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0047496	Biological Process	vesicle transport along microtubule	Interproscan
GO:0048311	Biological Process	mitochondrion distribution	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-