Detailed information of pred2_45545.1 in Architeuthis dux Gene info
Gene IDAnnotationScaffoldStartEndStrand
pred2_45545.1RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGSc3x4tf_18177692777738036-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|RBR

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17976zf-RING_12RING/Ubox like zinc-binding domainDomainInterproscan
PF17978zf-RING_14RING/Ubox like zinc-binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002867DomainIBR domainInterproscan
IPR003977FamilyE3 ubiquitin-protein ligase parkinInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR031127FamilyE3 ubiquitin ligase RBR familyInterproscan
IPR041170DomainRING/Ubox-like zinc-binding domainInterproscan
IPR041565DomainParkin, RING/Ubox like zinc-binding domainInterproscan
IPR044066DomainTRIAD supradomainInterproscan
IPR047536DomainE3 ubiquitin-protein ligase parkin, Rcat domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031624Molecular Functionubiquitin conjugating enzyme bindingInterproscan
GO:0032436Biological Processpositive regulation of proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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